HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:136.9 nTPM
HPA:136.9 nTPM
GTEx:147.7 nTPM
FANTOM5:169.0 Scaled Tags Per Million
Pig:53.3 nTPM
Mouse:136.7 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018849Antibody HPA019536Antibody CAB033987
Glial cells Not detectedMediumLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.9
Sample id Sample description nTPM
Hippocampus
nTPM: 100.8
2621 Female, age 67, right hemisphere 111.3
2148 Female, age 91, left hemisphere 105.3
1898 Male, age 80, left hemisphere 100.6
1855 Male, age 76, left hemisphere 96.0
2529 Female, age 94, left hemisphere 96.0
1911 Female, age 85, right hemisphere 95.9
Dentate gyrus
nTPM: 97.7
2531 Female, age 67, both hemispheres 112.8
1927 Female, age 91, both hemispheres 107.7
2246 Female, age 85, both hemispheres 94.8
2010 Male, age 76, both hemispheres 91.4
2528 Male, age 74, both hemispheres 90.7
2530 Female, age 94, left hemisphere 88.4
Entorhinal gyrus
nTPM: 134.4
2613 Female, age 94, left hemisphere 181.8
2686 Male, age 75, right hemisphere 137.1
1938 Female, age 85, left hemisphere 134.6
1787 Male, age 76, left hemisphere 133.2
2764 Male, age 80, right hemisphere 122.5
2117 Female, age 91, right hemisphere 97.6
Hippocampus, CA1
nTPM: 102.6
2749 Male, age 80, left hemisphere 111.9
2045 Male, age 76, both hemispheres 109.9
2527 Male, age 74, both hemispheres 101.4
2082 Female, age 91, right hemisphere 99.6
1873 Female, age 85, both hemispheres 90.4
Hippocampus, CA2
nTPM: 102.8
2437 Female, age 94, left hemisphere 120.1
1892 Male, age 76, both hemispheres 118.3
1940 Female, age 85, left hemisphere 105.1
2113 Female, age 91, right hemisphere 100.7
1963 Male, age 80, left hemisphere 88.8
2249 Male, age 74, both hemispheres 83.9
Hippocampus, CA3
nTPM: 110.3
1867 Male, age 76, both hemispheres 121.0
2620 Female, age 94, left hemisphere 117.7
2137 Male, age 80, left hemisphere 117.4
2861 Female, age 67, both hemispheres 116.8
1891 Female, age 85, both hemispheres 97.8
2436 Male, age 74, both hemispheres 91.1
Parahippocampal cortex
nTPM: 128.0
2622 Female, age 67, right hemisphere 157.7
2693 Female, age 94, both hemispheres 141.7
1850 Male, age 80, both hemispheres 131.1
2532 Female, age 72, left hemisphere 125.9
2018 Male, age 76, both hemispheres 125.7
2692 Male, age 74, both hemispheres 121.5
1933 Female, age 85, both hemispheres 121.1
1990 Female, age 91, right hemisphere 121.1
2245 Female, age 91, both hemispheres 121.1
2250 Female, age 67, right hemisphere 112.9
Perirhinal gyrus
nTPM: 136.9
1847 Female, age 91, left hemisphere 148.6
1794 Male, age 80, right hemisphere 136.5
2848 Male, age 76, right hemisphere 134.4
1841 Female, age 85, right hemisphere 132.5
2521 Female, age 94, right hemisphere 132.3
Subiculum
nTPM: 105.6
2619 Male, age 74, both hemispheres 122.1
2438 Female, age 94, left hemisphere 111.1
1977 Female, age 85, both hemispheres 108.1
1901 Male, age 80, both hemispheres 102.6
2729 Female, age 91, right hemisphere 96.4
2042 Male, age 76, both hemispheres 93.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 147.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 147.7
Samples: 197

Max nTPM: 352.1
Min nTPM: 38.1
Std nTPM: 62.9
Median nTPM: 132.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 352.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 327.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 304.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 299.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 281.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 280.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 280.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 280.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 280.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 277.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 272.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.0
FF:10153-102I9 76 years, female 182.2
FF:10169-103B7 60 years, female 155.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.2
Sample A Female 27.9
Sample B Female 25.2
Sample C Male 32.2
Sample D Male 25.7
Entorhinal cortex
nTPM: 53.3
Samples: 4

Max nTPM: 58.6
Min nTPM: 50.7
Sample A Female 51.0
Sample B Female 52.8
Sample C Male 58.6
Sample D Male 50.7
Subiculum
nTPM: 35.7
Samples: 4

Max nTPM: 49.3
Min nTPM: 30.3
Sample A Female 49.3
Sample B Female 32.1
Sample C Male 30.3
Sample D Male 31.2
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 33.5
Min nTPM: 20.1
Sample A Female 20.1
Sample B Female 24.9
Sample C Male 33.5
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 136.7
Samples: 4

Max nTPM: 140.8
Min nTPM: 131.9
Sample A Male 131.9
Sample B Male 133.9
Sample C Female 140.8
Sample D Female 140.3
Hippocampal formation
nTPM: 91.9
Samples: 4

Max nTPM: 109.9
Min nTPM: 79.5
Sample A Male 109.9
Sample B Male 87.1
Sample C Female 79.5
Sample D Female 90.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69838381 Antisense, RP_050301_02_G07, Mouse strain C57BL/6J (56 days, male) 6.8

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