COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.9 nTPM
HPA:11.3 nTPM
GTEx:14.9 nTPM
FANTOM5:31.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA004926
Glandular cells Low



COLON - HPA RNA-seqi
Average nTPM 11.3
overview
Male, age 54 		Colon sample 67
nTPM: 8.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 17.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 10.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 9.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 9.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 6.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.9
Samples: 373

Max nTPM: 69.9
Min nTPM: 5.9
Std nTPM: 7.3
Median nTPM: 13.1
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 69.9
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 66.1
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 57.3
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 49.4
GTEX-15DZA-1026-SM-6PAND 30-39 years, female 44.5
GTEX-1HBPH-2526-SM-ACKXK 40-49 years, female 38.8
GTEX-1QCLY-2026-SM-EVR4C 30-39 years, male 37.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 36.8
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 36.0
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 34.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 33.2
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Colon - Transverse
Average nTPM: 13.4
Samples: 406

Max nTPM: 116.3
Min nTPM: 5.8
Std nTPM: 10.7
Median nTPM: 10.9
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 116.3
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 104.5
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 95.8
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 72.2
GTEX-14JIY-3326-SM-6871E 60-69 years, male 60.0
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 59.2
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 49.1
GTEX-1AYCT-1826-SM-731EG 50-59 years, male 48.7
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 48.7
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 41.7
GTEX-14PK6-1726-SM-6871J 70-79 years, female 40.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 31.2
FF:10014-101C5 62,83,84 years, mixed 31.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.