PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:130.4 nTPM
HPA:130.4 nTPM
FANTOM5:34.4 Scaled Tags Per Million
Mouse:37.8 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 130.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 115.4
2090 Male, age 80, both hemispheres 118.0
2301 Female, age 85, both hemispheres 116.0
1984 Male, age 76, both hemispheres 115.5
2188 Female, age 91, both hemispheres 112.2
Area postrema
nTPM: 121.0
2799 Male, age 61, both hemispheres 130.2
2054 Male, age 76, both hemispheres 118.1
2306 Male, age 80, both hemispheres 114.6
Cuneate nuclei
nTPM: 118.6
2131 Male, age 76, both hemispheres 122.4
2376 Male, age 61, both hemispheres 117.9
2381 Male, age 80, both hemispheres 115.5
Dorsal cochlear nucleus
nTPM: 120.8
2058 Male, age 76, both hemispheres 126.0
2187 Female, age 91, both hemispheres 121.6
2802 Male, age 74, right hemisphere 121.1
2370 Male, age 61, both hemispheres 120.7
2378 Male, age 80, both hemispheres 114.7
Dorsal medullary reticular nucleus
nTPM: 123.9
2040 Female, age 85, both hemispheres 127.0
2373 Male, age 61, both hemispheres 123.1
2088 Male, age 76, both hemispheres 121.6
Dorsal motor vagal complex
nTPM: 123.6
2133 Female, age 91, both hemispheres 129.4
2844 Male, age 55, unknown 129.1
2797 Male, age 61, both hemispheres 126.2
2000 Male, age 74, unknown 125.7
2643 Male, age 74, both hemispheres 124.8
2813 Female, age 72, unknown 122.2
2185 Male, age 76, both hemispheres 117.3
2807 Female, age 85, both hemispheres 114.1
Dorsal tegmental nucleus
nTPM: 121.5
2083 Male, age 80, both hemispheres 124.3
2358 Male, age 61, both hemispheres 122.2
1936 Male, age 76, left hemisphere 120.0
2326 Male, age 74, both hemispheres 119.5
Dorsolateral tegmental area
nTPM: 122.1
2141 Male, age 76, both hemispheres 126.0
2654 Male, age 80, both hemispheres 125.5
2751 Female, age 85, both hemispheres 123.5
2360 Male, age 74, both hemispheres 118.2
2337 Male, age 61, both hemispheres 117.2
Gigantocellular reticular nuclei, medullary
nTPM: 120.6
1876 Female, age 85, both hemispheres 123.5
2314 Male, age 61, both hemispheres 122.6
2462 Male, age 74, both hemispheres 122.6
2022 Male, age 76, right hemisphere 120.8
2310 Male, age 80, both hemispheres 119.4
2387 Female, age 91, both hemispheres 114.6
Gigantocellular reticular nuclei, pars
nTPM: 121.1
2084 Female, age 85, both hemispheres 126.8
2168 Male, age 76, both hemispheres 126.8
2336 Male, age 61, both hemispheres 122.5
2706 Male, age 80, both hemispheres 114.7
2330 Male, age 80, both hemispheres 114.5
Inferior olive
nTPM: 120.7
2563 Male, age 74, both hemispheres 126.6
2085 Female, age 85, both hemispheres 124.2
2178 Male, age 61, both hemispheres 117.9
2628 Female, age 91, both hemispheres 117.8
2379 Male, age 80, both hemispheres 117.2
Kolliker-Fuse nucleus
nTPM: 118.6
2163 Male, age 80, both hemispheres 121.3
2315 Male, age 76, right hemisphere 119.8
2793 Female, age 91, left hemisphere 114.7
Lateral lemniscal nuclei
nTPM: 120.0
2169 Male, age 76, both hemispheres 129.4
2746 Female, age 85, left hemisphere 122.5
2453 Male, age 74, right hemisphere 119.8
2036 Male, age 80, both hemispheres 115.9
2320 Female, age 91, left hemisphere 112.1
Lateral medullary reticular nucleus
nTPM: 120.5
2804 Female, age 91, both hemispheres 125.0
2044 Male, age 76, both hemispheres 124.1
2190 Female, age 85, both hemispheres 120.3
2374 Male, age 61, both hemispheres 119.5
2305 Male, age 74, both hemispheres 118.6
2852 Male, age 80, both hemispheres 115.2
Lateral parabrachial nucleus
nTPM: 120.5
2139 Female, age 85, right hemisphere 126.5
2790 Male, age 61, both hemispheres 121.9
2013 Male, age 80, both hemispheres 118.9
2792 Male, age 76, both hemispheres 114.5
Lateral vestibular nucleus
nTPM: 121.5
2184 Male, age 76, both hemispheres 123.1
2311 Male, age 80, both hemispheres 119.9
Locus coeruleus
nTPM: 130.4
2123 Female, age 91, both hemispheres 139.0
2162 Male, age 80, both hemispheres 131.7
1980 Male, age 76, both hemispheres 130.3
2720 Male, age 74, both hemispheres 129.0
2014 Male, age 55, unknown 128.6
2788 Male, age 74, unknown 127.9
2317 Female, age 72, unknown 126.7
Medial olivary nucleus
nTPM: 115.7
2138 Female, age 91, both hemispheres 119.7
1943 Male, age 61, both hemispheres 116.5
2851 Male, age 80, both hemispheres 114.2
1962 Male, age 76, both hemispheres 112.3
Medial parabrachial nucleus
nTPM: 123.6
2170 Female, age 91, both hemispheres 129.9
2156 Male, age 61, both hemispheres 125.3
2786 Male, age 76, both hemispheres 121.4
2854 Male, age 80, both hemispheres 121.3
2463 Female, age 85, right hemisphere 120.0
Medial periolivary nuclei
nTPM: 121.1
2063 Male, age 76, both hemispheres 133.5
2171 Female, age 85, both hemispheres 127.3
2791 Male, age 74, right hemisphere 117.1
2458 Female, age 91, both hemispheres 114.1
2081 Male, age 80, both hemispheres 113.4
Medial vestibular nucleus
nTPM: 124.7
2093 Male, age 80, both hemispheres 126.6
2134 Male, age 76, both hemispheres 126.3
2743 Female, age 85, both hemispheres 125.8
2803 Female, age 91, both hemispheres 124.5
2624 Male, age 61, both hemispheres 123.8
2801 Male, age 74, both hemispheres 121.2
Motor facial nucleus
nTPM: 121.7
2062 Male, age 76, both hemispheres 136.8
2365 Male, age 74, right hemisphere 120.7
2126 Male, age 61, both hemispheres 120.4
2697 Female, age 85, both hemispheres 120.3
2327 Male, age 80, both hemispheres 117.2
2795 Female, age 91, both hemispheres 115.1
Motor hypoglossal nucleus
nTPM: 123.1
2125 Female, age 91, both hemispheres 126.2
2132 Female, age 85, both hemispheres 126.2
2461 Male, age 61, both hemispheres 123.3
2277 Male, age 76, both hemispheres 122.0
2182 Male, age 80, both hemispheres 117.8
Motor trigeminal nucleus
nTPM: 119.7
2335 Male, age 61, both hemispheres 123.2
2309 Male, age 76, both hemispheres 121.2
2079 Male, age 80, both hemispheres 118.5
2560 Male, age 74, both hemispheres 118.1
2321 Female, age 91, both hemispheres 117.3
Nuclei of the trapezoid body
nTPM: 125.8
1983 Male, age 76, both hemispheres 137.1
2735 Female, age 85, both hemispheres 130.4
2159 Male, age 61, both hemispheres 125.9
2166 Male, age 80, both hemispheres 119.3
2368 Female, age 91, both hemispheres 116.1
Nucleus ambiguus
nTPM: 121.9
2096 Female, age 85, both hemispheres 128.8
2071 Male, age 76, both hemispheres 115.0
Nucleus cuneatus
nTPM: 117.4
2562 Male, age 61, both hemispheres 121.3
2564 Male, age 74, both hemispheres 121.1
2100 Male, age 76, both hemispheres 118.9
2805 Female, age 91, both hemispheres 118.5
2380 Male, age 80, both hemispheres 113.0
2808 Female, age 85, both hemispheres 111.8
Nucleus gracilis
nTPM: 113.7
2627 Male, age 74, both hemispheres 120.3
2299 Female, age 85, both hemispheres 110.6
2382 Male, age 80, both hemispheres 110.2
Nucleus raphe magnus
nTPM: 123.7
2172 Female, age 85, both hemispheres 132.9
2160 Male, age 61, both hemispheres 131.6
2455 Male, age 74, both hemispheres 125.8
2051 Male, age 76, both hemispheres 121.5
2328 Male, age 80, both hemispheres 118.5
2459 Female, age 91, both hemispheres 112.2
Nucleus raphe obscurus
nTPM: 115.6
2800 Male, age 61, midline 120.7
2845 Female, age 85, midline 116.3
2142 Male, age 76, midline 109.6
Nucleus raphe pallidus
nTPM: 118.2
2183 Male, age 80, midline 125.4
1924 Male, age 61, midline 118.3
2145 Male, age 76, midline 110.8
Nucleus tractus solitarii
nTPM: 120.4
2656 Male, age 76, both hemispheres 125.6
2144 Female, age 91, right hemisphere 121.3
2307 Male, age 80, both hemispheres 119.1
2191 Female, age 85, both hemispheres 115.8
Paramedian reticular nucleus
nTPM: 121.6
2057 Male, age 80, both hemispheres 125.9
2313 Male, age 61, both hemispheres 125.0
2050 Female, age 85, both hemispheres 121.8
2052 Male, age 76, both hemispheres 113.5
Parvicellular reticular nuclei
nTPM: 119.9
2119 Male, age 80, both hemispheres 122.2
2095 Male, age 76, both hemispheres 122.1
2558 Male, age 74, both hemispheres 115.4
Parvicellular reticular nuclei, medullary
nTPM: 125.3
2181 Male, age 80, left hemisphere 126.5
2189 Female, age 91, both hemispheres 126.1
2091 Female, age 85, both hemispheres 123.2
Peritrigeminal nucleus
nTPM: 124.2
2067 Female, age 85, both hemispheres 125.3
2179 Male, age 61, both hemispheres 124.8
2136 Male, age 76, both hemispheres 122.5
Pontine nuclei
nTPM: 123.7
2787 Female, age 85, both hemispheres 137.1
1863 Male, age 55, unknown 131.3
1968 Male, age 76, left hemisphere 129.8
2727 Male, age 61, right hemisphere 125.5
2109 Female, age 72, unknown 123.2
2115 Male, age 80, left hemisphere 115.8
2454 Male, age 74, left hemisphere 115.5
2319 Female, age 91, both hemispheres 111.5
Pontine raphe nucleus
nTPM: 127.6
2122 Female, age 85, midline 128.8
2853 Male, age 76, midline 126.3
Posteroventral cochlear nucleus
nTPM: 118.8
2752 Female, age 85, both hemispheres 128.4
2070 Male, age 76, both hemispheres 124.9
2371 Male, age 61, both hemispheres 118.6
2341 Male, age 80, both hemispheres 114.8
2135 Female, age 91, both hemispheres 107.2
Prepositus hypoglossal nucleus
nTPM: 122.9
2855 Female, age 85, right hemisphere 124.9
2086 Male, age 80, both hemispheres 121.0
Principal sensory trigeminal nucleus
nTPM: 121.1
2158 Male, age 61, both hemispheres 132.4
2008 Male, age 80, left hemisphere 120.3
2324 Male, age 76, both hemispheres 120.1
2367 Female, age 91, left hemisphere 111.5
Reticular pontine nucleus, caudal
nTPM: 120.1
2092 Male, age 76, both hemispheres 127.6
2332 Male, age 80, right hemisphere 119.7
2559 Male, age 74, both hemispheres 118.6
2457 Female, age 91, both hemispheres 114.5
Reticular pontine nucleus, oral
nTPM: 122.1
2361 Male, age 74, both hemispheres 126.1
2167 Male, age 76, both hemispheres 124.6
1939 Male, age 80, both hemispheres 124.4
2012 Female, age 85, both hemispheres 119.6
2366 Female, age 91, both hemispheres 115.6
Reticulotegmental nucleus
nTPM: 121.9
2325 Male, age 76, both hemispheres 127.6
2452 Male, age 74, both hemispheres 122.9
2322 Female, age 91, both hemispheres 119.5
2333 Male, age 80, both hemispheres 117.4
Spinal trigeminal nucleus, caudal
nTPM: 121.6
2447 Male, age 76, both hemispheres 127.4
2390 Female, age 91, both hemispheres 122.8
2642 Male, age 74, both hemispheres 121.1
2308 Male, age 80, both hemispheres 118.7
2312 Male, age 61, both hemispheres 118.1
Spinal trigeminal nucleus, interpolar
nTPM: 126.5
2066 Male, age 76, right hemisphere 136.9
2389 Female, age 91, both hemispheres 126.6
2033 Male, age 80, both hemispheres 126.3
2625 Male, age 61, both hemispheres 121.8
2386 Female, age 85, both hemispheres 121.0
Spinal trigeminal nucleus, oral
nTPM: 122.2
1978 Male, age 76, both hemispheres 124.7
2737 Female, age 85, both hemispheres 121.5
2164 Male, age 80, both hemispheres 120.3
Spinal vestibular nucleus
nTPM: 123.2
2780 Male, age 80, both hemispheres 127.6
2186 Female, age 91, both hemispheres 125.4
2806 Female, age 85, both hemispheres 123.2
2748 Male, age 76, both hemispheres 122.5
2796 Male, age 61, both hemispheres 121.3
2384 Male, age 74, both hemispheres 119.3
Subcoeruleus area
nTPM: 123.4
2323 Female, age 91, left hemisphere 129.3
1958 Male, age 80, both hemispheres 124.0
2451 Male, age 74, both hemispheres 122.8
2089 Male, age 76, left hemisphere 122.7
2369 Female, age 85, left hemisphere 118.4
Superior olive
nTPM: 121.9
1875 Female, age 85, both hemispheres 129.1
2364 Male, age 74, right hemisphere 124.1
2020 Male, age 76, both hemispheres 123.6
2329 Male, age 80, right hemisphere 118.5
2561 Female, age 91, both hemispheres 114.1
Superior vestibular nucleus
nTPM: 123.5
2061 Male, age 76, both hemispheres 125.5
2383 Male, age 74, both hemispheres 123.3
2015 Male, age 80, both hemispheres 121.7
Ventral medullary reticular nucleus
nTPM: 125.4
2060 Male, age 76, both hemispheres 127.4
2372 Male, age 61, both hemispheres 123.3
Ventral periolivary nuclei
nTPM: 122.3
2130 Female, age 85, both hemispheres 128.7
2165 Male, age 80, both hemispheres 126.9
2023 Male, age 76, both hemispheres 117.5
2794 Female, age 91, left hemisphere 115.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 122.4
2741 Female, age 85, both hemispheres 125.3
2180 Male, age 61, both hemispheres 124.7
2302 Female, age 91, both hemispheres 123.1
1986 Male, age 76, both hemispheres 122.5
2118 Male, age 80, both hemispheres 116.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 120.3
2359 Male, age 61, both hemispheres 124.2
1959 Male, age 76, both hemispheres 123.4
2840 Female, age 85, both hemispheres 121.8
2161 Male, age 80, both hemispheres 120.7
2449 Male, age 74, both hemispheres 120.2
2456 Female, age 91, both hemispheres 111.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 33.7
FF:10182-103D2 60 years, female 37.2
FF:10165-103B3 76 years, female 30.2
Medulla oblongata
Scaled Tags Per Million: 20.5
FF:10038-101F2 18-64 years, mixed 27.8
FF:10174-103C3 60 years, female 17.3
FF:10155-103A2 76 years, female 16.3
Pons
Scaled Tags Per Million: 34.4
FF:10033-101E6 18-54 years, mixed 34.4

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 37.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 37.8
Samples: 4

Max nTPM: 40.9
Min nTPM: 35.6
Sample A Male 40.9
Sample B Male 35.6
Sample C Female 37.5
Sample D Female 37.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.0
68545875 Antisense, RP_050120_01_F05, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 0.1
68545875 Antisense, RP_050120_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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