COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.2 nTPM
HPA:2.4 nTPM
GTEx:11.2 nTPM
FANTOM5:6.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA021884Antibody HPA048471
Glandular cells LowNot detected



COLON - HPA RNA-seqi
Average nTPM 2.4
overview
Male, age 54 		Colon sample 67
nTPM: 3.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 3.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 2.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 4.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.2
Samples: 373

Max nTPM: 38.2
Min nTPM: 2.1
Std nTPM: 6.7
Median nTPM: 9.3
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 38.2
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 36.4
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 34.1
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 32.4
GTEX-1I1GR-2226-SM-ARL7F 60-69 years, male 32.4
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 31.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 30.6
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 28.8
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 28.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 28.3
GTEX-1J8JJ-2426-SM-D4P4A 60-69 years, female 27.6
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Colon - Transverse
Average nTPM: 7.6
Samples: 406

Max nTPM: 31.1
Min nTPM: 1.5
Std nTPM: 5.2
Median nTPM: 5.9
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 31.1
GTEX-14BIN-3026-SM-5ZZUS 50-59 years, female 27.7
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 27.7
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 27.1
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 26.1
GTEX-16Z82-2226-SM-6LPJ7 60-69 years, male 24.0
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 24.0
GTEX-X4EO-2526-SM-EWRM8 60-69 years, female 22.7
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 21.9
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 20.9
GTEX-1PPGY-2826-SM-DTX9H 60-69 years, male 20.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 6.3
FF:10014-101C5 62,83,84 years, mixed 6.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.