HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:32.0 nTPM
HPA:32.0 nTPM
GTEx:39.1 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Pig:40.6 nTPM
Mouse:59.0 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.0
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
1911 Female, age 85, right hemisphere 32.2
2529 Female, age 94, left hemisphere 30.5
2621 Female, age 67, right hemisphere 27.9
2148 Female, age 91, left hemisphere 27.8
1855 Male, age 76, left hemisphere 25.8
1898 Male, age 80, left hemisphere 24.3
Dentate gyrus
nTPM: 28.2
2530 Female, age 94, left hemisphere 38.2
2531 Female, age 67, both hemispheres 27.6
2010 Male, age 76, both hemispheres 27.1
2528 Male, age 74, both hemispheres 26.9
2246 Female, age 85, both hemispheres 25.9
1927 Female, age 91, both hemispheres 23.2
Entorhinal gyrus
nTPM: 27.4
2117 Female, age 91, right hemisphere 33.0
2764 Male, age 80, right hemisphere 31.4
2686 Male, age 75, right hemisphere 28.3
1787 Male, age 76, left hemisphere 24.6
1938 Female, age 85, left hemisphere 24.1
2613 Female, age 94, left hemisphere 23.3
Hippocampus, CA1
nTPM: 23.7
1873 Female, age 85, both hemispheres 27.8
2045 Male, age 76, both hemispheres 24.5
2082 Female, age 91, right hemisphere 24.2
2527 Male, age 74, both hemispheres 22.1
2749 Male, age 80, left hemisphere 20.0
Hippocampus, CA2
nTPM: 25.0
1963 Male, age 80, left hemisphere 30.2
2437 Female, age 94, left hemisphere 26.1
2249 Male, age 74, both hemispheres 25.9
2113 Female, age 91, right hemisphere 25.1
1940 Female, age 85, left hemisphere 22.5
1892 Male, age 76, both hemispheres 20.1
Hippocampus, CA3
nTPM: 24.7
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 24.9
2620 Female, age 94, left hemisphere 24.3
2861 Female, age 67, both hemispheres 23.9
2137 Male, age 80, left hemisphere 21.9
2436 Male, age 74, both hemispheres 21.2
Parahippocampal cortex
nTPM: 23.3
2018 Male, age 76, both hemispheres 30.8
2532 Female, age 72, left hemisphere 29.0
2692 Male, age 74, both hemispheres 27.2
1933 Female, age 85, both hemispheres 23.1
2245 Female, age 91, both hemispheres 23.0
1990 Female, age 91, right hemisphere 22.7
1850 Male, age 80, both hemispheres 22.3
2693 Female, age 94, both hemispheres 19.9
2622 Female, age 67, right hemisphere 18.5
2250 Female, age 67, right hemisphere 16.5
Perirhinal gyrus
nTPM: 18.8
2848 Male, age 76, right hemisphere 22.3
1794 Male, age 80, right hemisphere 18.7
1847 Female, age 91, left hemisphere 18.1
2521 Female, age 94, right hemisphere 17.8
1841 Female, age 85, right hemisphere 17.3
Subiculum
nTPM: 32.0
2042 Male, age 76, both hemispheres 41.8
1901 Male, age 80, both hemispheres 37.3
2438 Female, age 94, left hemisphere 34.2
2729 Female, age 91, right hemisphere 27.0
2619 Male, age 74, both hemispheres 26.0
1977 Female, age 85, both hemispheres 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.1
Samples: 197

Max nTPM: 149.9
Min nTPM: 7.5
Std nTPM: 19.0
Median nTPM: 35.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 149.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 103.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 100.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 98.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 91.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 88.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 82.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 76.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 74.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 71.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 70.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.9
FF:10153-102I9 76 years, female 63.4
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 50.5
Min nTPM: 31.3
Sample A Female 50.5
Sample B Female 39.7
Sample C Male 40.9
Sample D Male 31.3
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 29.9
Sample A Female 31.8
Sample B Female 29.9
Sample C Male 34.4
Sample D Male 30.7
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 42.6
Min nTPM: 28.3
Sample A Female 42.6
Sample B Female 31.3
Sample C Male 31.4
Sample D Male 28.3
Ventral hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 42.6
Min nTPM: 26.3
Sample A Female 30.3
Sample B Female 26.3
Sample C Male 39.1
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 67.9
Min nTPM: 52.5
Sample A Male 58.6
Sample B Male 52.5
Sample C Female 57.2
Sample D Female 67.9
Hippocampal formation
nTPM: 52.2
Samples: 4

Max nTPM: 53.1
Min nTPM: 51.3
Sample A Male 51.4
Sample B Male 51.3
Sample C Female 53.0
Sample D Female 53.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71493057 Antisense, RP_050913_02_A12, Mouse strain C57BL/6J (56 days, male) 0.5

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