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MVB12B
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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:57.2 nTPM
HPA:57.2 nTPM
GTEx:116.4 nTPM
FANTOM5:110.1 Scaled Tags Per Million
Pig:49.5 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 57.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 47.9
2816 Male, age 47, midline 53.9
2048 Male, age 55, midline 49.8
1981 Female, age 72, midline 48.4
2194 Female, age 79, both hemispheres 47.2
2565 Male, age 75, midline 40.2
Cervical spinal cord, dorsal horn
nTPM: 49.9
2296 Male, age 66, both hemispheres 91.2
2173 Female, age 72, unknown 65.6
1877 Male, age 55, unknown 44.1
2069 Male, age 47, both hemispheres 43.1
2721 Male, age 90, both hemispheres 28.7
2297 Male, age 75, both hemispheres 26.3
Cervical spinal cord, ventral horn
nTPM: 57.2
2820 Female, age 79, both hemispheres 63.5
2068 Male, age 55, unknown 58.8
2098 Female, age 72, unknown 57.9
2480 Male, age 75, both hemispheres 57.5
2809 Male, age 90, both hemispheres 54.2
2295 Male, age 66, both hemispheres 51.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 116.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 116.4
Samples: 159

Max nTPM: 305.4
Min nTPM: 27.4
Std nTPM: 48.8
Median nTPM: 110.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 305.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 274.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 251.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 233.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 231.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 227.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 210.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 208.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 206.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 204.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 189.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 188.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 181.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 178.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 175.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 173.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 173.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 173.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 171.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 169.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 168.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 165.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 165.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 164.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 163.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 163.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 162.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 161.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 160.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 158.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 157.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 154.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 153.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 148.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 147.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 147.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 146.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 146.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 146.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 145.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 144.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 144.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 141.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 141.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 140.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 139.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 135.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 134.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 134.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 133.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 133.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 132.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 132.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 131.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 131.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 129.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 127.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 126.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 126.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 125.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 120.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 120.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 118.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 116.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 116.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 116.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 116.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 114.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 114.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 114.4
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 114.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 113.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 113.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 113.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 111.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 111.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 111.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 111.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 110.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 110.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 109.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 109.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 109.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 109.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 109.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 109.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 108.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 107.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 107.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 107.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 106.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 106.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 104.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 104.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 104.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 103.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 102.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 102.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 101.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 100.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 99.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 99.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 98.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 96.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 95.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 94.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 92.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 92.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 91.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 88.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 86.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 86.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 86.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 85.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 85.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 85.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 85.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 84.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 84.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 84.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 84.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 84.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 84.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 81.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 81.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 78.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 78.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 78.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 77.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 74.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 74.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 68.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 67.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 66.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 66.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 64.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 64.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 63.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 62.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 61.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 59.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 58.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 58.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 57.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 55.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 54.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 52.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 51.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 50.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 44.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 43.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 43.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 42.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 39.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 38.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 35.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 35.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 34.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 27.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 110.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 110.1
FF:10181-103D1 60 years, female 126.0
FF:10159-103A6 76 years, female 94.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 49.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 47.8
Samples: 4

Max nTPM: 52.1
Min nTPM: 44.3
Sample A Female 52.1
Sample B Female 44.4
Sample C Male 44.3
Sample D Male 50.5
Ventral spinal cord
nTPM: 49.5
Samples: 4

Max nTPM: 58.5
Min nTPM: 41.8
Sample A Female 58.5
Sample B Female 41.8
Sample C Male 45.3
Sample D Male 52.5

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