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PCBP2
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:227.4 nTPM
HPA:227.4 nTPM
GTEx:229.0 nTPM
FANTOM5:1133.3 Scaled Tags Per Million
Pig:269.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 227.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 227.4
2565 Male, age 75, midline 237.6
2048 Male, age 55, midline 229.9
2194 Female, age 79, both hemispheres 226.9
1981 Female, age 72, midline 226.8
2816 Male, age 47, midline 216.1
Cervical spinal cord, dorsal horn
nTPM: 215.1
2173 Female, age 72, unknown 246.9
2296 Male, age 66, both hemispheres 236.0
2069 Male, age 47, both hemispheres 210.4
1877 Male, age 55, unknown 208.1
2297 Male, age 75, both hemispheres 199.4
2721 Male, age 90, both hemispheres 190.0
Cervical spinal cord, ventral horn
nTPM: 226.0
2098 Female, age 72, unknown 258.3
2809 Male, age 90, both hemispheres 227.9
2295 Male, age 66, both hemispheres 225.9
2820 Female, age 79, both hemispheres 221.4
2068 Male, age 55, unknown 220.0
2480 Male, age 75, both hemispheres 202.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 229.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 229.0
Samples: 159

Max nTPM: 423.8
Min nTPM: 162.3
Std nTPM: 32.1
Median nTPM: 227.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 423.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 305.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 294.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 293.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 292.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 291.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 288.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 284.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 284.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 282.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 280.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 280.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 274.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 274.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 272.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 271.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 270.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 269.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 265.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 264.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 260.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 260.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 259.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 259.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 258.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 255.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 254.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 252.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 251.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 251.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 251.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 251.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 248.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 247.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 246.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 245.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 244.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 244.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 244.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 244.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 243.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 243.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 243.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 242.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 241.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 241.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 241.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 241.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 241.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 239.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 239.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 239.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 237.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 237.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 236.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 236.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 235.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 234.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 234.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 233.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 233.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 233.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 233.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 233.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 232.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 232.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 232.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 231.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 231.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 229.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 229.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 229.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 228.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 228.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 228.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 228.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 227.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 227.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 227.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 227.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 226.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 225.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 225.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 224.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 224.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 224.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 223.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 223.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 222.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 221.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 221.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 221.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 221.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 220.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 218.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 216.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 215.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 215.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 215.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 214.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 213.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 213.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 213.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 213.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 213.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 212.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 212.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 211.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 211.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 211.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 211.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 211.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 210.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 210.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 209.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 209.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 208.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 207.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 207.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 207.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 206.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 205.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 205.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 205.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 204.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 203.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 202.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 202.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 202.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 202.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 201.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 201.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 201.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 200.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 200.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 200.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 199.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 199.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 198.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 198.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 198.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 196.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 196.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 194.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 194.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 192.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 191.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 190.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 189.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 189.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 188.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 187.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 183.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 180.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 180.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 176.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 172.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 170.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 162.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1133.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1133.3
FF:10159-103A6 76 years, female 1412.6
FF:10181-103D1 60 years, female 854.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 269.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 249.1
Samples: 4

Max nTPM: 302.9
Min nTPM: 215.1
Sample A Female 215.1
Sample B Female 241.3
Sample C Male 302.9
Sample D Male 237.0
Ventral spinal cord
nTPM: 269.0
Samples: 4

Max nTPM: 276.9
Min nTPM: 256.9
Sample A Female 269.9
Sample B Female 272.2
Sample C Male 276.9
Sample D Male 256.9

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