We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLC25A29
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • SLC25A29
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:68.7 nTPM
HPA:68.7 nTPM
GTEx:151.0 nTPM
FANTOM5:104.3 Scaled Tags Per Million
Pig:18.7 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 68.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 67.3
2816 Male, age 47, midline 74.9
1981 Female, age 72, midline 66.7
2565 Male, age 75, midline 65.9
2194 Female, age 79, both hemispheres 64.7
2048 Male, age 55, midline 64.4
Cervical spinal cord, dorsal horn
nTPM: 66.4
2296 Male, age 66, both hemispheres 93.9
2173 Female, age 72, unknown 68.5
1877 Male, age 55, unknown 63.7
2069 Male, age 47, both hemispheres 62.8
2721 Male, age 90, both hemispheres 56.2
2297 Male, age 75, both hemispheres 53.6
Cervical spinal cord, ventral horn
nTPM: 68.7
2098 Female, age 72, unknown 77.1
2068 Male, age 55, unknown 69.7
2820 Female, age 79, both hemispheres 69.3
2480 Male, age 75, both hemispheres 69.1
2809 Male, age 90, both hemispheres 63.8
2295 Male, age 66, both hemispheres 63.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 151.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 151.0
Samples: 159

Max nTPM: 341.6
Min nTPM: 41.9
Std nTPM: 59.1
Median nTPM: 141.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 341.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 337.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 279.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 278.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 274.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 270.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 259.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 253.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 252.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 248.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 248.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 246.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 242.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 241.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 241.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 236.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 233.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 231.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 231.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 230.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 225.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 225.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 223.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 219.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 213.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 212.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 211.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 209.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 209.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 209.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 209.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 203.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 200.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 199.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 198.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 197.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 196.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 192.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 189.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 189.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 185.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 184.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 183.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 182.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 181.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 179.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 178.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 177.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 176.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 173.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 172.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 172.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 169.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 163.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 162.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 162.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 161.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 161.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 160.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 159.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 157.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 156.5
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 156.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 156.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 155.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 155.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 153.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 152.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 152.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 151.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 151.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 151.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 150.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 149.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 146.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 145.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 145.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 143.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 143.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 141.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 140.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 140.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 139.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 139.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 138.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 137.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 136.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 136.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 135.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 133.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 133.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 132.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 131.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 130.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 130.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 129.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 129.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 129.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 129.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 128.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 127.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 126.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 126.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 123.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 123.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 122.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 118.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 118.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 117.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 116.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 116.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 115.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 115.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 114.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 113.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 113.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 112.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 110.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 109.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 108.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 108.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 106.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 104.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 101.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 100.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 100.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 99.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 99.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 97.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 97.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 95.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 93.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 93.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 93.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 92.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 90.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 89.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 87.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 86.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 85.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 84.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 81.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 80.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 79.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 78.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 78.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 77.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 76.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 76.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 71.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 69.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 68.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 60.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 57.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 55.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 50.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 46.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 43.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 41.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 104.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 104.3
FF:10159-103A6 76 years, female 106.7
FF:10181-103D1 60 years, female 101.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 18.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 17.2
Sample A Female 18.1
Sample B Female 17.5
Sample C Male 21.9
Sample D Male 17.2
Ventral spinal cord
nTPM: 16.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.3
Sample A Female 15.7
Sample B Female 18.1
Sample C Male 14.3
Sample D Male 16.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.