HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:56.9 nTPM
HPA:56.9 nTPM
GTEx:50.9 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:14.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030781
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.9
Sample id Sample description nTPM
Hippocampus
nTPM: 53.3
1911 Female, age 85, right hemisphere 56.5
2529 Female, age 94, left hemisphere 54.8
2148 Female, age 91, left hemisphere 53.4
2621 Female, age 67, right hemisphere 52.0
1898 Male, age 80, left hemisphere 51.9
1855 Male, age 76, left hemisphere 51.3
Dentate gyrus
nTPM: 56.9
2528 Male, age 74, both hemispheres 59.8
2530 Female, age 94, left hemisphere 59.3
2531 Female, age 67, both hemispheres 58.1
2246 Female, age 85, both hemispheres 57.0
2010 Male, age 76, both hemispheres 56.9
1927 Female, age 91, both hemispheres 50.4
Entorhinal gyrus
nTPM: 56.9
2613 Female, age 94, left hemisphere 61.8
1787 Male, age 76, left hemisphere 58.1
2764 Male, age 80, right hemisphere 57.0
2686 Male, age 75, right hemisphere 55.7
2117 Female, age 91, right hemisphere 55.3
1938 Female, age 85, left hemisphere 53.3
Hippocampus, CA1
nTPM: 54.0
2082 Female, age 91, right hemisphere 59.3
2527 Male, age 74, both hemispheres 53.5
1873 Female, age 85, both hemispheres 53.0
2045 Male, age 76, both hemispheres 52.8
2749 Male, age 80, left hemisphere 51.7
Hippocampus, CA2
nTPM: 56.0
1940 Female, age 85, left hemisphere 61.2
2437 Female, age 94, left hemisphere 57.8
2249 Male, age 74, both hemispheres 57.5
2113 Female, age 91, right hemisphere 56.5
1892 Male, age 76, both hemispheres 51.8
1963 Male, age 80, left hemisphere 51.5
Hippocampus, CA3
nTPM: 55.3
2436 Male, age 74, both hemispheres 58.0
2861 Female, age 67, both hemispheres 57.3
1891 Female, age 85, both hemispheres 56.6
2620 Female, age 94, left hemisphere 54.9
1867 Male, age 76, both hemispheres 53.2
2137 Male, age 80, left hemisphere 52.0
Parahippocampal cortex
nTPM: 54.8
2692 Male, age 74, both hemispheres 58.3
2018 Male, age 76, both hemispheres 57.1
2622 Female, age 67, right hemisphere 56.8
1990 Female, age 91, right hemisphere 55.8
2693 Female, age 94, both hemispheres 55.1
2250 Female, age 67, right hemisphere 54.2
2532 Female, age 72, left hemisphere 54.0
1933 Female, age 85, both hemispheres 53.8
1850 Male, age 80, both hemispheres 51.8
2245 Female, age 91, both hemispheres 51.2
Perirhinal gyrus
nTPM: 53.6
1794 Male, age 80, right hemisphere 54.3
2848 Male, age 76, right hemisphere 53.9
2521 Female, age 94, right hemisphere 53.4
1841 Female, age 85, right hemisphere 53.3
1847 Female, age 91, left hemisphere 52.9
Subiculum
nTPM: 56.0
2042 Male, age 76, both hemispheres 58.8
2619 Male, age 74, both hemispheres 57.4
1977 Female, age 85, both hemispheres 56.7
2729 Female, age 91, right hemisphere 56.7
1901 Male, age 80, both hemispheres 55.0
2438 Female, age 94, left hemisphere 51.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.9
Samples: 197

Max nTPM: 260.9
Min nTPM: 18.7
Std nTPM: 21.7
Median nTPM: 47.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 260.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 122.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 111.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 107.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 107.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 83.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 82.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 81.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 78.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 75.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 73.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.1
FF:10153-102I9 76 years, female 34.7
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 9.6
Sample A Female 15.8
Sample B Female 15.0
Sample C Male 15.8
Sample D Male 9.6
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.6
Sample A Female 10.3
Sample B Female 11.4
Sample C Male 12.7
Sample D Male 7.6
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 15.5
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 15.5
Sample C Male 15.0
Sample D Male 13.7
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 11.8
Sample A Female 17.7
Sample B Female 16.5
Sample C Male 20.8
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.5
Sample A Male 11.5
Sample B Male 9.5
Sample C Female 11.1
Sample D Female 10.0
Hippocampal formation
nTPM: 14.9
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.9
Sample A Male 12.9
Sample B Male 14.2
Sample C Female 17.4
Sample D Female 15.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
78534484 Antisense, RP_070620_01_A01, Mouse strain C57BL/6J (56 days, male) 0.1

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