HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.8 nTPM
HPA:18.8 nTPM
GTEx:16.3 nTPM
FANTOM5:12.6 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:24.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042773
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.1
2621 Female, age 67, right hemisphere 12.9
1855 Male, age 76, left hemisphere 11.5
2529 Female, age 94, left hemisphere 10.1
1898 Male, age 80, left hemisphere 9.3
1911 Female, age 85, right hemisphere 8.8
2148 Female, age 91, left hemisphere 7.8
Dentate gyrus
nTPM: 8.9
1927 Female, age 91, both hemispheres 12.7
2530 Female, age 94, left hemisphere 11.7
2010 Male, age 76, both hemispheres 10.4
2246 Female, age 85, both hemispheres 7.3
2528 Male, age 74, both hemispheres 6.3
2531 Female, age 67, both hemispheres 5.4
Entorhinal gyrus
nTPM: 18.8
2613 Female, age 94, left hemisphere 35.7
1787 Male, age 76, left hemisphere 22.4
1938 Female, age 85, left hemisphere 17.6
2764 Male, age 80, right hemisphere 17.6
2686 Male, age 75, right hemisphere 14.7
2117 Female, age 91, right hemisphere 5.0
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 23.7
2527 Male, age 74, both hemispheres 11.9
2082 Female, age 91, right hemisphere 7.3
1873 Female, age 85, both hemispheres 6.7
2045 Male, age 76, both hemispheres 3.9
Hippocampus, CA2
nTPM: 11.2
2437 Female, age 94, left hemisphere 18.7
1892 Male, age 76, both hemispheres 15.9
2249 Male, age 74, both hemispheres 9.0
1963 Male, age 80, left hemisphere 8.8
2113 Female, age 91, right hemisphere 8.0
1940 Female, age 85, left hemisphere 6.7
Hippocampus, CA3
nTPM: 10.2
2137 Male, age 80, left hemisphere 21.2
1867 Male, age 76, both hemispheres 13.3
2861 Female, age 67, both hemispheres 10.5
2436 Male, age 74, both hemispheres 6.7
1891 Female, age 85, both hemispheres 6.4
2620 Female, age 94, left hemisphere 3.3
Parahippocampal cortex
nTPM: 15.2
2622 Female, age 67, right hemisphere 19.9
1990 Female, age 91, right hemisphere 18.6
2245 Female, age 91, both hemispheres 17.0
2250 Female, age 67, right hemisphere 17.0
2692 Male, age 74, both hemispheres 16.1
2532 Female, age 72, left hemisphere 13.9
2693 Female, age 94, both hemispheres 13.7
1933 Female, age 85, both hemispheres 13.6
1850 Male, age 80, both hemispheres 12.6
2018 Male, age 76, both hemispheres 9.9
Perirhinal gyrus
nTPM: 14.6
1847 Female, age 91, left hemisphere 21.0
2521 Female, age 94, right hemisphere 18.0
1794 Male, age 80, right hemisphere 13.5
2848 Male, age 76, right hemisphere 10.5
1841 Female, age 85, right hemisphere 10.2
Subiculum
nTPM: 11.7
2438 Female, age 94, left hemisphere 17.0
1977 Female, age 85, both hemispheres 14.4
2619 Male, age 74, both hemispheres 14.1
1901 Male, age 80, both hemispheres 13.6
2042 Male, age 76, both hemispheres 7.9
2729 Female, age 91, right hemisphere 3.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 40.3
Min nTPM: 1.5
Std nTPM: 7.6
Median nTPM: 14.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 40.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 39.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 34.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 32.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 31.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 31.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 31.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 30.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.6
FF:10153-102I9 76 years, female 12.8
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.4
Sample A Female 4.6
Sample B Female 5.8
Sample C Male 6.0
Sample D Male 3.4
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 9.3
Min nTPM: 9.1
Sample A Female 9.3
Sample B Female 9.1
Sample C Male 9.1
Sample D Male 9.3
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.5
Sample A Female 10.5
Sample B Female 7.0
Sample C Male 9.8
Sample D Male 6.5
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 12.0
Min nTPM: 4.6
Sample A Female 9.8
Sample B Female 6.7
Sample C Male 12.0
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.5
Sample A Male 21.8
Sample B Male 20.5
Sample C Female 24.1
Sample D Female 29.6
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 15.6
Min nTPM: 11.8
Sample A Male 13.0
Sample B Male 15.2
Sample C Female 11.8
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
68844456 Antisense, RP_050222_01_F07, Mouse strain C57BL/6J (56 days, male) 7.6
71924056 Antisense, RP_051017_02_H06, Mouse strain C57BL/6J (56 days, male) 7.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.