COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.7 nTPM
HPA:5.3 nTPM
GTEx:35.7 nTPM
FANTOM5:18.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 5.3
overview
Male, age 54 		Colon sample 67
nTPM: 2.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.7
Samples: 373

Max nTPM: 101.3
Min nTPM: 3.8
Std nTPM: 15.4
Median nTPM: 34.2
GTEX-1QCLY-2026-SM-EVR4C 30-39 years, male 101.3
GTEX-1R7EU-1826-SM-DTX9L 60-69 years, male 101.3
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 98.5
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 83.0
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 77.0
GTEX-1QP28-2226-SM-DTX8C 50-59 years, female 75.2
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 75.0
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 71.5
GTEX-1KANA-1726-SM-CY8IG 20-29 years, male 71.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 70.0
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 68.6
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Colon - Transverse
Average nTPM: 18.2
Samples: 406

Max nTPM: 77.9
Min nTPM: 2.2
Std nTPM: 14.0
Median nTPM: 15.3
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 77.9
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 76.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 75.8
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 65.0
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 61.7
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 61.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 57.7
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 55.0
GTEX-Y114-1526-SM-4TT79 50-59 years, female 54.9
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 53.7
GTEX-17F96-2026-SM-79ON4 70-79 years, male 52.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 18.6
FF:10014-101C5 62,83,84 years, mixed 18.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.