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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:88.9 nTPM
FANTOM5:122.6 Scaled Tags Per Million
Pig:93.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA014372
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 88.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 88.9
Samples: 246

Max nTPM: 450.0
Min nTPM: 8.7
Std nTPM: 62.7
Median nTPM: 72.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 450.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 384.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 343.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 333.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 315.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 297.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 235.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 231.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 230.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 203.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 192.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 187.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 182.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 178.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 175.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 175.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 174.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 173.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 173.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 172.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 169.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 167.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 167.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 166.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 165.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 165.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 164.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 162.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 161.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 158.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 156.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 155.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 149.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 145.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 144.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 143.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 142.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 136.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 135.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 135.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 133.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 131.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 129.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 128.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 127.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 127.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 126.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 124.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 124.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 122.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 122.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 121.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 121.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 118.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 118.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 117.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 116.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 116.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 113.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 113.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 112.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 111.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 108.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 106.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 105.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 104.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 102.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 101.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 100.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 97.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 96.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 95.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 95.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 95.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 95.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 93.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 91.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 89.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 88.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 87.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 86.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 86.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 84.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 83.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 82.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 81.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 79.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 79.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 79.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 77.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 77.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 76.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 75.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 75.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 74.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 74.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 74.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 71.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 70.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 70.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 69.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 68.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 68.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 66.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 66.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 66.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 64.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 63.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 63.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 63.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 63.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 62.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 62.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 60.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 59.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 58.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 56.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 56.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 55.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 53.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 53.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 53.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 52.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 51.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 49.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 49.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 47.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 46.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 44.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 43.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 43.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 43.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 43.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 42.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 42.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 41.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 41.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 39.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 39.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 38.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 38.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 37.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 37.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 37.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 36.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 36.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 35.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 34.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 33.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 33.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 31.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 30.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 30.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 30.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 29.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 29.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 29.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 28.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 28.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 27.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 27.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 26.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 25.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 25.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 24.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 21.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 19.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 13.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 8.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 122.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 122.6
FF:10164-103B2 76 years, female 122.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 93.5
Pig sample Sample description nTPM
Caudate
nTPM: 93.5
Samples: 4

Max nTPM: 104.2
Min nTPM: 82.5
Sample A Female 104.2
Sample B Female 82.5
Sample C Male 94.0
Sample D Male 93.4

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