HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.4 nTPM
HPA:32.4 nTPM
GTEx:35.4 nTPM
FANTOM5:63.1 Scaled Tags Per Million
Pig:49.5 nTPM
Mouse:112.7 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046688
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.0
2529 Female, age 94, left hemisphere 33.9
1898 Male, age 80, left hemisphere 32.7
1911 Female, age 85, right hemisphere 31.6
2621 Female, age 67, right hemisphere 31.6
2148 Female, age 91, left hemisphere 31.5
1855 Male, age 76, left hemisphere 30.8
Dentate gyrus
nTPM: 32.4
2530 Female, age 94, left hemisphere 37.1
2246 Female, age 85, both hemispheres 33.0
2531 Female, age 67, both hemispheres 32.4
2010 Male, age 76, both hemispheres 31.2
2528 Male, age 74, both hemispheres 30.8
1927 Female, age 91, both hemispheres 29.8
Entorhinal gyrus
nTPM: 31.5
2117 Female, age 91, right hemisphere 33.3
1787 Male, age 76, left hemisphere 32.1
2764 Male, age 80, right hemisphere 32.0
1938 Female, age 85, left hemisphere 31.3
2613 Female, age 94, left hemisphere 30.4
2686 Male, age 75, right hemisphere 29.8
Hippocampus, CA1
nTPM: 31.1
2749 Male, age 80, left hemisphere 32.9
2527 Male, age 74, both hemispheres 32.6
1873 Female, age 85, both hemispheres 32.1
2045 Male, age 76, both hemispheres 29.6
2082 Female, age 91, right hemisphere 28.2
Hippocampus, CA2
nTPM: 31.8
1940 Female, age 85, left hemisphere 33.4
1892 Male, age 76, both hemispheres 32.4
2437 Female, age 94, left hemisphere 31.7
1963 Male, age 80, left hemisphere 31.4
2249 Male, age 74, both hemispheres 31.4
2113 Female, age 91, right hemisphere 30.2
Hippocampus, CA3
nTPM: 32.3
1867 Male, age 76, both hemispheres 34.7
1891 Female, age 85, both hemispheres 33.0
2620 Female, age 94, left hemisphere 31.9
2861 Female, age 67, both hemispheres 31.7
2436 Male, age 74, both hemispheres 31.5
2137 Male, age 80, left hemisphere 31.0
Parahippocampal cortex
nTPM: 31.1
2250 Female, age 67, right hemisphere 32.5
2532 Female, age 72, left hemisphere 32.3
2245 Female, age 91, both hemispheres 31.9
1990 Female, age 91, right hemisphere 31.8
2692 Male, age 74, both hemispheres 31.7
1933 Female, age 85, both hemispheres 31.1
1850 Male, age 80, both hemispheres 31.0
2018 Male, age 76, both hemispheres 30.4
2622 Female, age 67, right hemisphere 29.0
2693 Female, age 94, both hemispheres 28.9
Perirhinal gyrus
nTPM: 31.2
2848 Male, age 76, right hemisphere 31.9
1841 Female, age 85, right hemisphere 31.8
2521 Female, age 94, right hemisphere 31.1
1794 Male, age 80, right hemisphere 30.9
1847 Female, age 91, left hemisphere 30.5
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 32.7
1901 Male, age 80, both hemispheres 32.4
2042 Male, age 76, both hemispheres 32.1
2438 Female, age 94, left hemisphere 31.2
2619 Male, age 74, both hemispheres 30.9
2729 Female, age 91, right hemisphere 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 73.3
Min nTPM: 23.0
Std nTPM: 8.0
Median nTPM: 33.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 73.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 71.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 66.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 59.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 57.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 55.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 55.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 55.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.1
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 53.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.5
Samples: 4

Max nTPM: 56.3
Min nTPM: 45.1
Sample A Female 56.3
Sample B Female 50.9
Sample C Male 45.1
Sample D Male 45.6
Entorhinal cortex
nTPM: 36.7
Samples: 4

Max nTPM: 40.8
Min nTPM: 32.1
Sample A Female 39.0
Sample B Female 40.8
Sample C Male 34.7
Sample D Male 32.1
Subiculum
nTPM: 40.7
Samples: 4

Max nTPM: 51.2
Min nTPM: 36.8
Sample A Female 51.2
Sample B Female 37.6
Sample C Male 37.2
Sample D Male 36.8
Ventral hippocampus
nTPM: 44.5
Samples: 4

Max nTPM: 53.8
Min nTPM: 34.5
Sample A Female 46.0
Sample B Female 34.5
Sample C Male 53.8
Sample D Male 43.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.4
Samples: 4

Max nTPM: 105.0
Min nTPM: 90.2
Sample A Male 90.2
Sample B Male 96.0
Sample C Female 98.2
Sample D Female 105.0
Hippocampal formation
nTPM: 112.7
Samples: 4

Max nTPM: 124.7
Min nTPM: 104.1
Sample A Male 105.4
Sample B Male 116.4
Sample C Female 124.7
Sample D Female 104.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
73716596 Antisense, RP_051206_03_D10, Mouse strain C57BL/6J (56 days, male) 11.6

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