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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:216.2 nTPM
FANTOM5:386.8 Scaled Tags Per Million
Pig:231.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA012947
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 216.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 216.2
Samples: 246

Max nTPM: 409.6
Min nTPM: 67.2
Std nTPM: 66.6
Median nTPM: 216.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 409.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 387.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 369.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 363.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 361.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 357.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 353.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 353.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 345.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 339.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 333.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 330.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 329.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 329.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 320.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 318.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 314.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 304.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 304.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 303.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 302.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 300.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 298.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 296.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 295.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 294.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 293.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 293.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 292.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 290.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 287.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 287.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 286.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 286.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 285.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 285.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 283.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 283.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 283.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 282.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 282.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 282.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 281.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 280.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 280.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 280.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 278.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 277.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 276.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 276.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 275.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 275.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 274.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 273.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 273.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 273.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 272.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 267.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 266.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 266.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 264.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 264.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 263.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 261.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 259.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 258.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 258.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 258.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 258.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 258.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 257.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 256.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 255.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 254.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 253.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 253.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 251.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 251.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 249.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 248.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 248.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 246.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 245.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 244.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 243.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 243.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 242.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 242.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 241.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 241.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 240.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 240.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 240.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 238.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 238.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 237.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 236.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 236.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 234.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 233.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 233.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 233.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 232.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 231.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 229.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 228.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 227.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 225.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 225.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 225.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 225.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 224.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 223.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 223.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 221.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 221.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 218.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 218.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 218.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 218.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 217.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 216.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 215.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 215.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 213.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 211.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 210.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 210.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 210.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 209.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 209.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 209.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 208.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 208.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 207.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 207.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 207.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 206.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 206.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 205.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 205.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 204.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 203.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 200.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 199.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 199.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 197.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 195.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 194.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 193.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 193.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 193.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 193.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 192.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 191.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 190.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 188.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 188.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 188.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 187.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 186.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 186.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 184.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 184.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 183.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 182.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 182.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 182.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 180.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 178.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 175.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 175.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 175.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 175.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 175.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 175.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 173.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 172.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 171.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 170.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 169.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 168.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 165.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 163.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 162.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 161.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 161.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 160.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 159.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 159.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 158.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 158.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 157.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 155.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 153.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 152.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 150.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 147.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 144.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 144.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 141.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 140.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 138.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 137.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 137.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 136.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 135.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 134.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 132.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 129.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 126.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 126.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 126.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 125.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 123.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 122.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 121.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 120.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 119.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 118.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 117.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 116.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 114.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 113.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 109.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 109.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 99.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 97.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 87.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 87.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 69.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 386.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 386.8
FF:10164-103B2 76 years, female 386.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 231.3
Pig sample Sample description nTPM
Caudate
nTPM: 231.2
Samples: 4

Max nTPM: 271.4
Min nTPM: 197.9
Sample A Female 197.9
Sample B Female 256.4
Sample C Male 271.4
Sample D Male 199.2

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