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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA061542
Pigment epithelial cells
High
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 115.3
Min nTPM: 24.1
Std nTPM: 21.6
Median nTPM:
490_1
67 years, female
115.3
379_1
60 years, male
111.2
375_1
74 years, female
110.3
414_1
84 years, female
110.3
142_1
61 years, female
103.7
99_1
64 years, male
102.7
347_1
72 years, male
102.6
42_1
85 years, male
95.1
266_1
85 years, male
94.5
491_1
89 years, female
91.9
119_1
70 years, female
88.3
115_1
83 years, male
85.7
352_1
62 years, male
83.9
386_1
76 years, male
82.8
120_1
70 years, female
81.2
126_1
63 years, male
79.9
35_1
74 years, female
76.4
6_1
73 years, female
75.6
153_1
70 years, female
75.4
162_1
79 years, female
74.8
447_1
81 years, male
74.1
394_1
75 years, female
72.4
265_1
87 years, male
72.0
307_1
66 years, female
71.4
468_1
89 years, male
71.3
349_1
83 years, male
69.4
466_1
57 years, female
68.4
355_1
70 years, female
66.8
404_1
82 years, female
65.7
356_1
87 years, female
65.1
315_1
62 years, female
64.9
217_1
76 years, male
62.5
173_1
67 years, male
61.2
117_1
61 years, male
61.0
109_1
81 years, female
59.9
229_1
69 years, female
59.8
32_1
67 years, male
59.1
526_1
61 years, male
58.4
286_1
68 years, female
58.0
413_1
59 years, female
57.5
246_1
77 years, male
57.4
415_1
77 years, female
57.2
396_1
62 years, male
56.1
317_1
60 years, male
55.8
350_1
84 years, female
55.8
172_1
72 years, female
54.9
254_1
77 years, female
53.8
43_1
64 years, female
53.3
318_1
68 years, male
53.0
354_1
81 years, female
51.7
243_1
75 years, male
51.0
506_1
65 years, male
50.7
17_1
71 years, male
49.9
149_1
88 years, male
49.7
311_1
78 years, male
49.2
237_1
82 years, male
48.8
319_1
81 years, male
48.8
9_1
66 years, female
48.4
41_1
94 years, female
47.6
292_1
71 years, male
47.4
517_1
88 years, male
46.7
353_1
82 years, female
46.6
89_1
63 years, male
46.5
163_1
78 years, male
46.5
503_1
68 years, male
45.8
348_1
84 years, male
45.7
218_1
71 years, female
45.1
324_1
76 years, male
45.1
425_1
59 years, female
43.7
18_1
88 years, male
43.6
295_1
61 years, female
43.1
251_1
78 years, male
42.9
177_1
74 years, male
42.7
264_1
73 years, female
42.5
452_1
88 years, female
41.8
335_1
73 years, female
41.4
81_1
67 years, male
40.6
518_1
75 years, female
40.2
314_1
67 years, male
39.8
291_1
76 years, male
39.6
145_1
84 years, male
38.6
351_1
91 years, male
38.4
137_1
83 years, male
38.1
189_1
76 years, male
37.9
316_1
62 years, male
37.8
321_1
62 years, female
37.7
389_1
86 years, female
37.3
4_1
88 years, female
37.1
405_1
91 years, male
37.1
313_1
79 years, female
36.6
480_1
63 years, male
35.5
139_1
64 years, female
35.1
2_1
77 years, female
34.1
377_1
82 years, female
32.6
322_1
76 years, male
31.8
406_1
79 years, male
31.7
501_1
88 years, male
29.7
308_1
70 years, female
28.9
288_1
66 years, female
28.0
376_1
75 years, female
27.6
499_1
55 years, female
27.3
384_1
83 years, male
26.9
320_1
89 years, female
26.7
293_1
68 years, female
26.1
495_1
57 years, female
24.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
