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RPS26
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:744.1 nTPM
HPA:403.2 nTPM
GTEx:744.1 nTPM
FANTOM5:36.0 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043961
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 403.2
overview
Male, age 65
Small intestine sample 232
nTPM: 364.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 560.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 300.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 388.1

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 744.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 744.1
Samples: 187

Max nTPM: 2432.2
Min nTPM: 124.1
Std nTPM: 393.8
Median nTPM: 735.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2432.2
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2173.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1922.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1719.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1675.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1517.3
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1512.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1497.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1477.9
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1420.1
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1410.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1380.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1357.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1334.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1304.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1287.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1286.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1276.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1267.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1229.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1201.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1173.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1168.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1167.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1158.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1146.0
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1144.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1105.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1075.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1059.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1056.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1050.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1035.3
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1033.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1023.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1018.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1013.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1009.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1002.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 988.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 973.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 965.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 965.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 948.0
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 942.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 930.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 927.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 925.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 923.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 921.8
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 916.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 912.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 908.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 906.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 899.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 889.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 874.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 871.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 870.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 866.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 865.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 859.4
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 848.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 848.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 846.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 835.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 834.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 833.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 826.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 818.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 814.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 813.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 809.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 808.5
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 806.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 803.1
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 802.5
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 800.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 791.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 780.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 776.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 774.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 766.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 758.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 756.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 755.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 755.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 755.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 752.6
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 751.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 749.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 748.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 748.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 735.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 734.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 731.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 720.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 715.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 715.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 713.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 712.8
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 710.9
GTEX-1192X-2526-SM-59868 50-59 years, male 710.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 707.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 702.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 700.7
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 693.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 686.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 682.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 678.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 665.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 652.4
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 650.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 649.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 648.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 639.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 638.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 636.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 636.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 623.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 613.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 605.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 603.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 595.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 590.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 578.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 577.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 573.6
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 571.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 571.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 568.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 563.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 562.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 557.3
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 557.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 552.5
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 522.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 506.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 501.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 497.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 458.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 418.8
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 417.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 415.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 385.4
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 374.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 365.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 356.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 347.1
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 345.1
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 343.1
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 342.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 339.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 334.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 319.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 311.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 307.6
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 304.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 303.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 290.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 282.1
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 276.7
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 274.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 263.7
GTEX-13111-1426-SM-5DUW3 50-59 years, male 242.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 239.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 231.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 228.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 227.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 218.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 218.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 214.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 211.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 207.6
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 199.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 199.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 194.0
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 188.8
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 188.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 187.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 173.2
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 171.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 160.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 153.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 138.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 132.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 124.1
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 36.0
FF:10024-101D6 15,40,85 years, mixed 36.0

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