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RPL12
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1237.2 nTPM
HPA:984.1 nTPM
GTEx:1237.2 nTPM
FANTOM5:20.8 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003403
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 984.1
overview
Male, age 65
Small intestine sample 232
nTPM: 1244.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 936.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 960.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 794.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1237.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1237.2
Samples: 187

Max nTPM: 2528.3
Min nTPM: 600.3
Std nTPM: 355.6
Median nTPM: 1151.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2528.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2482.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2322.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2315.3
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2223.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2125.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 1999.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1960.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1941.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1928.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1922.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1889.6
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1876.7
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1846.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1790.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1779.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1706.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1670.7
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1660.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1633.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 1616.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1614.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1596.2
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1592.5
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1587.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1570.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1564.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1561.8
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1553.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1553.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1533.4
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1522.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1517.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1517.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1512.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1491.5
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1488.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1484.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1466.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1460.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1449.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1448.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1443.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1442.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1437.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1434.5
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1427.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1427.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1424.5
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1421.8
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1414.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1409.2
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1398.8
GTEX-1192X-2526-SM-59868 50-59 years, male 1390.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1383.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1380.9
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1370.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1361.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1356.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1355.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1345.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1345.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1336.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1330.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1327.0
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1315.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1303.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1299.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1291.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1281.2
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1279.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1278.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1276.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1264.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1262.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1260.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1257.7
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1256.8
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1253.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1252.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1251.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1246.7
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1243.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1240.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1236.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1222.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1222.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1211.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1210.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1207.5
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1206.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1160.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1158.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1151.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1150.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1149.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1145.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1143.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1140.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1136.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1135.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1133.3
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1129.7
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1128.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1127.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1125.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1123.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1122.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1121.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1118.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1117.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1116.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1110.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1110.3
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1109.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1105.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1095.7
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1084.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1084.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1078.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1072.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1071.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1070.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1069.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1067.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1066.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1062.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1059.4
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1052.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1037.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1035.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1028.9
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1021.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1014.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1012.2
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1007.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1006.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1006.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1000.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 998.7
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 986.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 980.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 979.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 978.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 973.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 970.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 959.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 954.8
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 953.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 951.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 950.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 949.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 943.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 940.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 936.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 931.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 918.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 901.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 898.6
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 892.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 889.0
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 886.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 875.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 870.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 870.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 869.5
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 853.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 850.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 848.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 833.9
GTEX-1122O-1326-SM-5H11F 60-69 years, female 831.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 824.5
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 817.6
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 815.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 795.0
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 794.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 753.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 746.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 739.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 720.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 709.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 707.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 687.4
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 670.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 632.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 632.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 600.3
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 20.8
FF:10024-101D6 15,40,85 years, mixed 20.8

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