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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:6677.7 nTPM
FANTOM5:2479.9 Scaled Tags Per Million
Pig:1357.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049222Antibody CAB002300
Glial cells LowHigh
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 6677.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 6677.7
Samples: 246

Max nTPM: 48450.3
Min nTPM: 724.5
Std nTPM: 6080.6
Median nTPM: 4663.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 48450.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 35130.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 31475.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 29080.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 26274.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 20704.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20467.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 19820.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 19272.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19155.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18114.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17668.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 17458.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 17370.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 17001.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 16598.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 16479.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16398.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 16280.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 16260.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 15909.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15713.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15059.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14896.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13977.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 12731.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 12662.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 12633.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 12619.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 12572.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12418.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 12159.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 11984.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 11944.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11942.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11837.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 11819.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11716.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11616.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11336.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 10940.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10784.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10671.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10436.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10425.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10306.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 10243.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 10147.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9954.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 9938.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 9802.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 9586.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9574.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 9265.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 9209.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 9189.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 9070.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8919.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 8902.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8745.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 8726.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8713.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8440.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8393.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 8371.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8317.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 8224.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8201.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8199.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 8038.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 7976.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7959.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7926.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 7853.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7754.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 7745.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7722.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7682.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7536.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7497.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 7183.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 7160.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 7080.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7037.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 7026.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 6992.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6796.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6416.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6373.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 6290.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6014.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 6000.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 5963.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5924.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 5848.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5798.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 5797.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 5729.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5724.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 5610.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5548.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 5384.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5347.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 5345.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 5344.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5305.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 5277.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 5276.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 5231.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 5229.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 5199.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5183.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 5106.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 5098.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 5040.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 5033.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 5032.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 5016.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4976.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4861.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 4856.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4796.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 4687.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4639.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4575.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4573.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 4562.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4522.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 4508.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4493.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 4433.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4402.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 4297.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 4243.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4210.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4205.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 4183.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 4054.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4043.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4041.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 4006.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 4001.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 3980.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3968.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3968.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 3961.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 3887.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 3880.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3851.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3846.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 3833.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 3831.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 3797.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 3748.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 3682.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3580.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 3561.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3559.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 3539.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3490.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 3465.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 3464.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 3424.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 3424.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 3351.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3289.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3258.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3161.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3160.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3149.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3147.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 3145.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 3144.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 3121.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3099.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 3022.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 2905.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2887.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 2851.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2813.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2810.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2795.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2794.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2674.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2671.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 2649.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 2626.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 2614.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2609.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2599.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2584.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2560.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2543.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 2521.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2517.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2516.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2496.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 2403.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2378.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 2362.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2334.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2283.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2269.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2241.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2232.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2229.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2226.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 2127.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2094.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2081.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2042.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2032.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 2019.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2003.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1958.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1916.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1906.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1886.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1873.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1852.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1834.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1828.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1794.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1766.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1742.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1733.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1715.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1689.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1575.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1562.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1527.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1519.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1506.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1462.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1438.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1415.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1389.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1322.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1257.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1157.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1147.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1071.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1008.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 842.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 725.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 724.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2479.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2479.9
FF:10164-103B2 76 years, female 2479.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1357.2
Pig sample Sample description nTPM
Caudate
nTPM: 1357.2
Samples: 4

Max nTPM: 1591.4
Min nTPM: 1103.7
Sample A Female 1221.6
Sample B Female 1103.7
Sample C Male 1591.4
Sample D Male 1512.2

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