HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:74.7 nTPM
HPA:74.7 nTPM
GTEx:158.3 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:78.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.7
Sample id Sample description nTPM
Hippocampus
nTPM: 72.9
1898 Male, age 80, left hemisphere 77.7
2529 Female, age 94, left hemisphere 76.7
1911 Female, age 85, right hemisphere 72.8
2148 Female, age 91, left hemisphere 72.2
2621 Female, age 67, right hemisphere 71.4
1855 Male, age 76, left hemisphere 66.5
Dentate gyrus
nTPM: 72.3
2530 Female, age 94, left hemisphere 83.6
2010 Male, age 76, both hemispheres 73.2
2528 Male, age 74, both hemispheres 73.2
2246 Female, age 85, both hemispheres 68.8
2531 Female, age 67, both hemispheres 67.9
1927 Female, age 91, both hemispheres 67.5
Entorhinal gyrus
nTPM: 74.7
2117 Female, age 91, right hemisphere 81.2
2764 Male, age 80, right hemisphere 78.7
1938 Female, age 85, left hemisphere 73.2
2613 Female, age 94, left hemisphere 72.4
1787 Male, age 76, left hemisphere 71.6
2686 Male, age 75, right hemisphere 71.1
Hippocampus, CA1
nTPM: 70.9
2749 Male, age 80, left hemisphere 78.2
2527 Male, age 74, both hemispheres 76.0
1873 Female, age 85, both hemispheres 68.3
2082 Female, age 91, right hemisphere 67.2
2045 Male, age 76, both hemispheres 64.9
Hippocampus, CA2
nTPM: 73.5
1963 Male, age 80, left hemisphere 84.0
2437 Female, age 94, left hemisphere 76.7
2249 Male, age 74, both hemispheres 74.2
1892 Male, age 76, both hemispheres 70.9
2113 Female, age 91, right hemisphere 68.8
1940 Female, age 85, left hemisphere 66.6
Hippocampus, CA3
nTPM: 70.8
2436 Male, age 74, both hemispheres 74.6
2861 Female, age 67, both hemispheres 72.8
2137 Male, age 80, left hemisphere 72.6
1891 Female, age 85, both hemispheres 70.6
1867 Male, age 76, both hemispheres 70.5
2620 Female, age 94, left hemisphere 63.7
Parahippocampal cortex
nTPM: 70.2
2245 Female, age 91, both hemispheres 73.5
2692 Male, age 74, both hemispheres 72.6
1933 Female, age 85, both hemispheres 72.0
1990 Female, age 91, right hemisphere 71.8
2018 Male, age 76, both hemispheres 71.8
2532 Female, age 72, left hemisphere 71.0
2622 Female, age 67, right hemisphere 69.5
2250 Female, age 67, right hemisphere 69.1
1850 Male, age 80, both hemispheres 66.8
2693 Female, age 94, both hemispheres 64.2
Perirhinal gyrus
nTPM: 68.3
1794 Male, age 80, right hemisphere 70.2
2521 Female, age 94, right hemisphere 70.2
1847 Female, age 91, left hemisphere 69.4
2848 Male, age 76, right hemisphere 67.2
1841 Female, age 85, right hemisphere 64.3
Subiculum
nTPM: 72.3
1977 Female, age 85, both hemispheres 73.7
1901 Male, age 80, both hemispheres 73.4
2619 Male, age 74, both hemispheres 72.6
2042 Male, age 76, both hemispheres 72.4
2729 Female, age 91, right hemisphere 72.0
2438 Female, age 94, left hemisphere 69.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 158.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.3
Samples: 197

Max nTPM: 342.5
Min nTPM: 42.4
Std nTPM: 48.9
Median nTPM: 152.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 342.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 311.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 288.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 283.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 264.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 260.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 257.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 253.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 250.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 245.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 239.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.1
FF:10153-102I9 76 years, female 41.8
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 51.2
Min nTPM: 19.1
Sample A Female 51.2
Sample B Female 31.8
Sample C Male 36.6
Sample D Male 19.1
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 39.4
Min nTPM: 19.4
Sample A Female 24.0
Sample B Female 38.2
Sample C Male 39.4
Sample D Male 19.4
Subiculum
nTPM: 29.0
Samples: 4

Max nTPM: 42.2
Min nTPM: 21.6
Sample A Female 42.2
Sample B Female 27.2
Sample C Male 25.0
Sample D Male 21.6
Ventral hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 39.7
Min nTPM: 24.9
Sample A Female 34.0
Sample B Female 29.3
Sample C Male 39.7
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 75.8
Min nTPM: 54.0
Sample A Male 65.6
Sample B Male 75.8
Sample C Female 73.1
Sample D Female 54.0
Hippocampal formation
nTPM: 78.2
Samples: 4

Max nTPM: 90.8
Min nTPM: 70.6
Sample A Male 79.8
Sample B Male 71.5
Sample C Female 70.6
Sample D Female 90.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71492790 Antisense, RP_050913_01_E09, Mouse strain C57BL/6J (56 days, male) 0.2

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