COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.1 nTPM
HPA:11.3 nTPM
GTEx:61.1 nTPM
FANTOM5:20.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB026820
Endothelial cells Low
Glandular cells Low

COLON - HPA RNA-seqi
Average nTPM 11.3
overview
Male, age 54 		Colon sample 67
nTPM: 17.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 19.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 23.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 12.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 9.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 14.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 61.1
Samples: 373

Max nTPM: 188.3
Min nTPM: 17.0
Std nTPM: 28.4
Median nTPM: 53.0
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 188.3
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 168.9
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 164.3
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 159.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 149.0
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 146.6
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 143.4
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 139.5
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 135.7
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 133.3
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 132.7
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Colon - Transverse
Average nTPM: 38.1
Samples: 406

Max nTPM: 126.5
Min nTPM: 15.1
Std nTPM: 17.1
Median nTPM: 32.2
GTEX-14JIY-3326-SM-6871E 60-69 years, male 126.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 126.3
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 103.6
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 100.9
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 94.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 90.3
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 89.0
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 86.4
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 86.0
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 82.8
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 81.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 20.3
FF:10014-101C5 62,83,84 years, mixed 20.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.