HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.7 nTPM
HPA:31.7 nTPM
GTEx:46.6 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:66.5 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
2621 Female, age 67, right hemisphere 32.3
1911 Female, age 85, right hemisphere 29.5
2148 Female, age 91, left hemisphere 27.6
1855 Male, age 76, left hemisphere 26.7
1898 Male, age 80, left hemisphere 22.1
2529 Female, age 94, left hemisphere 15.7
Dentate gyrus
nTPM: 24.1
1927 Female, age 91, both hemispheres 37.3
2531 Female, age 67, both hemispheres 28.4
2530 Female, age 94, left hemisphere 26.3
2010 Male, age 76, both hemispheres 23.1
2528 Male, age 74, both hemispheres 15.4
2246 Female, age 85, both hemispheres 14.0
Entorhinal gyrus
nTPM: 15.0
2613 Female, age 94, left hemisphere 26.2
2686 Male, age 75, right hemisphere 16.4
2764 Male, age 80, right hemisphere 15.1
1787 Male, age 76, left hemisphere 14.2
1938 Female, age 85, left hemisphere 11.2
2117 Female, age 91, right hemisphere 6.9
Hippocampus, CA1
nTPM: 28.3
2749 Male, age 80, left hemisphere 59.0
2527 Male, age 74, both hemispheres 27.5
1873 Female, age 85, both hemispheres 22.5
2045 Male, age 76, both hemispheres 21.9
2082 Female, age 91, right hemisphere 11.0
Hippocampus, CA2
nTPM: 19.9
1963 Male, age 80, left hemisphere 33.3
1892 Male, age 76, both hemispheres 29.9
2249 Male, age 74, both hemispheres 22.2
2437 Female, age 94, left hemisphere 16.8
2113 Female, age 91, right hemisphere 12.7
1940 Female, age 85, left hemisphere 4.8
Hippocampus, CA3
nTPM: 31.7
2137 Male, age 80, left hemisphere 62.3
2861 Female, age 67, both hemispheres 37.5
2620 Female, age 94, left hemisphere 33.2
1867 Male, age 76, both hemispheres 30.6
2436 Male, age 74, both hemispheres 15.3
1891 Female, age 85, both hemispheres 11.3
Parahippocampal cortex
nTPM: 14.8
2245 Female, age 91, both hemispheres 30.6
2622 Female, age 67, right hemisphere 23.7
2018 Male, age 76, both hemispheres 15.8
2250 Female, age 67, right hemisphere 14.9
2693 Female, age 94, both hemispheres 14.3
2532 Female, age 72, left hemisphere 11.0
1990 Female, age 91, right hemisphere 10.6
1850 Male, age 80, both hemispheres 10.0
2692 Male, age 74, both hemispheres 9.3
1933 Female, age 85, both hemispheres 7.8
Perirhinal gyrus
nTPM: 12.0
2521 Female, age 94, right hemisphere 15.7
1794 Male, age 80, right hemisphere 13.6
1847 Female, age 91, left hemisphere 13.3
1841 Female, age 85, right hemisphere 8.8
2848 Male, age 76, right hemisphere 8.5
Subiculum
nTPM: 14.1
1901 Male, age 80, both hemispheres 24.7
2042 Male, age 76, both hemispheres 21.2
1977 Female, age 85, both hemispheres 11.2
2438 Female, age 94, left hemisphere 10.2
2619 Male, age 74, both hemispheres 10.1
2729 Female, age 91, right hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.6
Samples: 197

Max nTPM: 188.4
Min nTPM: 2.1
Std nTPM: 27.2
Median nTPM: 41.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 188.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 139.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 118.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 104.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 104.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 103.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 103.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 97.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 97.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 95.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 93.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 9.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.2
Sample A Female 9.4
Sample B Female 9.6
Sample C Male 7.8
Sample D Male 7.2
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 6.9
Sample C Male 8.5
Sample D Male 7.7
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.3
Sample A Female 6.6
Sample B Female 5.3
Sample C Male 8.1
Sample D Male 5.9
Ventral hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 12.3
Min nTPM: 5.8
Sample A Female 6.4
Sample B Female 5.8
Sample C Male 8.7
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 39.4
Sample A Male 41.8
Sample B Male 41.8
Sample C Female 39.4
Sample D Female 39.7
Hippocampal formation
nTPM: 66.5
Samples: 4

Max nTPM: 85.7
Min nTPM: 49.6
Sample A Male 49.6
Sample B Male 71.0
Sample C Female 85.7
Sample D Female 59.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
68799059 Antisense, RP_050217_01_H12, Mouse strain C57BL/6J (56 days, male) 12.1

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