HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.4 nTPM
HPA:49.4 nTPM
GTEx:22.0 nTPM
FANTOM5:74.4 Scaled Tags Per Million
Pig:43.1 nTPM
Mouse:56.7 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034488
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.4
Sample id Sample description nTPM
Hippocampus
nTPM: 44.5
2621 Female, age 67, right hemisphere 47.4
1855 Male, age 76, left hemisphere 45.4
1898 Male, age 80, left hemisphere 44.2
2529 Female, age 94, left hemisphere 43.9
2148 Female, age 91, left hemisphere 43.2
1911 Female, age 85, right hemisphere 42.8
Dentate gyrus
nTPM: 43.8
2246 Female, age 85, both hemispheres 45.9
2531 Female, age 67, both hemispheres 45.7
2530 Female, age 94, left hemisphere 44.9
2010 Male, age 76, both hemispheres 43.7
1927 Female, age 91, both hemispheres 43.5
2528 Male, age 74, both hemispheres 39.1
Entorhinal gyrus
nTPM: 49.4
2613 Female, age 94, left hemisphere 56.7
2764 Male, age 80, right hemisphere 51.3
2686 Male, age 75, right hemisphere 50.2
1787 Male, age 76, left hemisphere 48.5
1938 Female, age 85, left hemisphere 45.6
2117 Female, age 91, right hemisphere 43.9
Hippocampus, CA1
nTPM: 44.6
2045 Male, age 76, both hemispheres 47.3
2749 Male, age 80, left hemisphere 46.7
2082 Female, age 91, right hemisphere 44.2
1873 Female, age 85, both hemispheres 42.6
2527 Male, age 74, both hemispheres 42.2
Hippocampus, CA2
nTPM: 43.6
2437 Female, age 94, left hemisphere 48.2
1892 Male, age 76, both hemispheres 47.4
1940 Female, age 85, left hemisphere 43.8
2113 Female, age 91, right hemisphere 42.9
2249 Male, age 74, both hemispheres 39.9
1963 Male, age 80, left hemisphere 39.6
Hippocampus, CA3
nTPM: 47.6
2861 Female, age 67, both hemispheres 51.3
2137 Male, age 80, left hemisphere 51.1
2620 Female, age 94, left hemisphere 51.1
2436 Male, age 74, both hemispheres 46.9
1867 Male, age 76, both hemispheres 43.4
1891 Female, age 85, both hemispheres 41.8
Parahippocampal cortex
nTPM: 48.5
2622 Female, age 67, right hemisphere 59.3
2532 Female, age 72, left hemisphere 50.8
2693 Female, age 94, both hemispheres 50.3
2245 Female, age 91, both hemispheres 49.6
2692 Male, age 74, both hemispheres 47.9
1850 Male, age 80, both hemispheres 47.5
2018 Male, age 76, both hemispheres 46.5
1933 Female, age 85, both hemispheres 45.4
2250 Female, age 67, right hemisphere 44.0
1990 Female, age 91, right hemisphere 43.9
Perirhinal gyrus
nTPM: 49.4
2848 Male, age 76, right hemisphere 54.1
1841 Female, age 85, right hemisphere 49.8
1794 Male, age 80, right hemisphere 49.0
1847 Female, age 91, left hemisphere 47.5
2521 Female, age 94, right hemisphere 46.6
Subiculum
nTPM: 45.6
2438 Female, age 94, left hemisphere 49.3
2042 Male, age 76, both hemispheres 47.3
2619 Male, age 74, both hemispheres 46.8
1901 Male, age 80, both hemispheres 46.4
1977 Female, age 85, both hemispheres 43.5
2729 Female, age 91, right hemisphere 40.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.0
Samples: 197

Max nTPM: 41.3
Min nTPM: 8.4
Std nTPM: 5.5
Median nTPM: 21.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 41.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 38.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 37.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 35.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 35.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 32.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 32.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 32.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 32.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 31.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 31.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.4
FF:10153-102I9 76 years, female 80.8
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.1
Samples: 4

Max nTPM: 46.1
Min nTPM: 40.1
Sample A Female 46.1
Sample B Female 44.7
Sample C Male 40.1
Sample D Male 41.6
Entorhinal cortex
nTPM: 33.2
Samples: 4

Max nTPM: 40.4
Min nTPM: 28.7
Sample A Female 40.4
Sample B Female 28.7
Sample C Male 34.7
Sample D Male 28.8
Subiculum
nTPM: 35.6
Samples: 4

Max nTPM: 40.3
Min nTPM: 31.7
Sample A Female 40.3
Sample B Female 31.7
Sample C Male 37.4
Sample D Male 32.9
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 52.6
Min nTPM: 30.5
Sample A Female 40.4
Sample B Female 30.5
Sample C Male 52.6
Sample D Male 40.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.7
Samples: 4

Max nTPM: 60.4
Min nTPM: 53.1
Sample A Male 59.4
Sample B Male 60.4
Sample C Female 53.7
Sample D Female 53.1
Hippocampal formation
nTPM: 55.9
Samples: 4

Max nTPM: 59.8
Min nTPM: 51.7
Sample A Male 54.7
Sample B Male 59.8
Sample C Female 51.7
Sample D Female 57.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
69059844 Antisense, RP_050317_04_B10, Mouse strain C57BL/6J (56 days, male) 12.6

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