HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:47.1 nTPM
FANTOM5:79.5 Scaled Tags Per Million
Pig:25.0 nTPM
Mouse:10.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034427
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
2529 Female, age 94, left hemisphere 29.4
2621 Female, age 67, right hemisphere 29.2
1855 Male, age 76, left hemisphere 28.7
1911 Female, age 85, right hemisphere 28.4
1898 Male, age 80, left hemisphere 26.0
2148 Female, age 91, left hemisphere 25.9
Dentate gyrus
nTPM: 26.1
2530 Female, age 94, left hemisphere 34.4
2528 Male, age 74, both hemispheres 27.3
2010 Male, age 76, both hemispheres 25.3
2246 Female, age 85, both hemispheres 24.8
2531 Female, age 67, both hemispheres 23.1
1927 Female, age 91, both hemispheres 21.7
Entorhinal gyrus
nTPM: 24.4
2117 Female, age 91, right hemisphere 28.8
2613 Female, age 94, left hemisphere 25.1
2686 Male, age 75, right hemisphere 23.7
1938 Female, age 85, left hemisphere 23.6
2764 Male, age 80, right hemisphere 23.2
1787 Male, age 76, left hemisphere 22.2
Hippocampus, CA1
nTPM: 25.8
2527 Male, age 74, both hemispheres 29.4
2082 Female, age 91, right hemisphere 28.9
1873 Female, age 85, both hemispheres 25.3
2749 Male, age 80, left hemisphere 22.7
2045 Male, age 76, both hemispheres 22.6
Hippocampus, CA2
nTPM: 26.9
2249 Male, age 74, both hemispheres 31.2
2437 Female, age 94, left hemisphere 31.2
2113 Female, age 91, right hemisphere 27.4
1963 Male, age 80, left hemisphere 25.8
1940 Female, age 85, left hemisphere 24.8
1892 Male, age 76, both hemispheres 21.0
Hippocampus, CA3
nTPM: 22.5
1891 Female, age 85, both hemispheres 25.1
2436 Male, age 74, both hemispheres 23.8
2861 Female, age 67, both hemispheres 23.4
1867 Male, age 76, both hemispheres 22.0
2620 Female, age 94, left hemisphere 21.0
2137 Male, age 80, left hemisphere 19.6
Parahippocampal cortex
nTPM: 23.9
2250 Female, age 67, right hemisphere 26.7
2692 Male, age 74, both hemispheres 26.4
2245 Female, age 91, both hemispheres 24.8
2622 Female, age 67, right hemisphere 24.1
2532 Female, age 72, left hemisphere 23.4
2018 Male, age 76, both hemispheres 23.2
1990 Female, age 91, right hemisphere 22.9
2693 Female, age 94, both hemispheres 22.6
1933 Female, age 85, both hemispheres 22.5
1850 Male, age 80, both hemispheres 22.1
Perirhinal gyrus
nTPM: 21.4
1847 Female, age 91, left hemisphere 24.4
2521 Female, age 94, right hemisphere 21.2
1841 Female, age 85, right hemisphere 21.1
2848 Male, age 76, right hemisphere 20.2
1794 Male, age 80, right hemisphere 20.0
Subiculum
nTPM: 27.3
2042 Male, age 76, both hemispheres 29.1
2438 Female, age 94, left hemisphere 28.9
2729 Female, age 91, right hemisphere 28.4
1901 Male, age 80, both hemispheres 26.6
2619 Male, age 74, both hemispheres 25.9
1977 Female, age 85, both hemispheres 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.1
Samples: 197

Max nTPM: 140.4
Min nTPM: 4.1
Std nTPM: 24.7
Median nTPM: 43.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 140.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 137.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 125.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 118.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 112.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 111.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 108.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 103.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 102.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 101.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 94.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.5
FF:10153-102I9 76 years, female 89.9
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 30.0
Min nTPM: 19.2
Sample A Female 30.0
Sample B Female 22.5
Sample C Male 28.4
Sample D Male 19.2
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.0
Sample A Female 11.1
Sample B Female 14.8
Sample C Male 11.0
Sample D Male 12.7
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.1
Sample A Female 11.4
Sample B Female 11.4
Sample C Male 8.1
Sample D Male 8.4
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 23.2
Min nTPM: 11.8
Sample A Female 12.9
Sample B Female 11.8
Sample C Male 13.1
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.9
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.5
Sample A Male 10.3
Sample B Male 9.5
Sample C Female 11.6
Sample D Female 12.3
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.6
Sample A Male 7.7
Sample B Male 6.6
Sample C Female 7.2
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71717592 Antisense, RP_050614_04_F12, Mouse strain C57BL/6J (56 days, male) 0.2
70473999 Antisense, RP_050614_04_F12, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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