Expression of MT-ND2 in pancreatic cancer

PANCREATIC CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-ND2 is not prognostic in pancreatic cancer

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 2139.69

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

3191.7

Number of samples

176

Samples

Sample	Description	FPKM
TCGA-3A-A9IV-01A	59 years, female, white, stage:ib, alive, 1103 days	13024.5
TCGA-2L-AAQM-01A	52 years, male, white, stage:iib, alive, 1383 days	12541.6
TCGA-FB-AAQ3-01A	65 years, female, white, stage:iib, dead, 31 days	10212.3
TCGA-H8-A6C1-01A	53 years, male, white, stage:iia, alive, 671 days	7859.4
TCGA-LB-A7SX-01A	74 years, female, black or african american, stage:iib, dead, 393 days	7852.9
TCGA-HV-A5A3-01A	50 years, male, asian, stage:iia, dead, 128 days	7689.8
TCGA-HZ-A9TJ-01A	70 years, male, white, stage:iv, alive, 603 days	7061.8
TCGA-2J-AABH-01A	61 years, male, white, stage:iia, alive, 1287 days	6887.7
TCGA-FB-AAQ2-01A	81 years, female, white, stage:iib, dead, 153 days	6760.8
TCGA-FB-AAPY-01A	71 years, male, white, stage:iib, dead, 1059 days	6605.0
TCGA-2J-AABK-01A	71 years, male, white, stage:iib, alive, 484 days	6586.5
TCGA-2J-AABT-01A	72 years, female, white, stage:iib, alive, 319 days	6535.5
TCGA-HV-A5A5-01A	61 years, female, asian, stage:iib, alive, 289 days	6213.7
TCGA-HZ-8637-01A	76 years, female, white, stage:iib, dead, 517 days	6191.3
TCGA-FB-AAPP-01A	71 years, male, white, stage:iib, dead, 485 days	5843.8
TCGA-RB-A7B8-01A	81 years, female, white, stage:iib, dead, 466 days	5734.8
TCGA-IB-A5SP-01A	77 years, male, white, stage:iia, alive, 482 days	5630.5
TCGA-FB-AAQ1-01A	49 years, male, white, stage:iib, dead, 123 days	5424.6
TCGA-HZ-A8P1-01A	81 years, male, white, stage:ib, alive, 7 days	5401.3
TCGA-3A-A9IL-01A	39 years, female, white, stage:i, alive, 2741 days	5377.6
TCGA-M8-A5N4-01A	48 years, female, stage:iia, alive, 584 days	5084.7
TCGA-US-A779-01A	54 years, female, white, stage:iib, dead, 511 days	4954.6
TCGA-Q3-AA2A-01A	64 years, female, white, stage:ib, alive, 95 days	4900.1
TCGA-2J-AABE-01A	73 years, male, white, stage:iia, alive, 676 days	4886.2
TCGA-F2-A44H-01A	65 years, male, white, stage:iia, alive, 586 days	4849.9
TCGA-HV-A5A6-01A	65 years, female, asian, stage:iib, dead, 2036 days	4726.4
TCGA-FB-AAPZ-01A	54 years, male, white, stage:iib, alive, 716 days	4674.5
TCGA-2L-AAQE-01A	56 years, male, white, stage:iib, dead, 684 days	4615.4
TCGA-HZ-8315-01A	54 years, female, white, stage:iia, dead, 299 days	4590.9
TCGA-2J-AABI-01A	55 years, female, white, stage:iia, alive, 969 days	4538.5
TCGA-3A-A9IO-01A	56 years, male, white, alive, 1942 days	4527.8
TCGA-2L-AAQL-01A	82 years, male, white, stage:iib, dead, 292 days	4494.3
TCGA-3A-A9IN-01A	62 years, female, white, stage:ib, alive, 2084 days	4421.3
TCGA-HV-AA8X-01A	75 years, female, asian, stage:iib, dead, 532 days	4398.1
TCGA-Q3-A5QY-01A	58 years, male, white, stage:iib, alive, 416 days	4396.2
TCGA-3A-A9IS-01A	67 years, male, white, stage:ib, alive, 998 days	4320.1
TCGA-XD-AAUH-01A	57 years, female, white, stage:iib, alive, 395 days	4294.8
TCGA-F2-A8YN-01A	76 years, male, white, stage:iia, alive, 517 days	4207.6
TCGA-HZ-8519-01A	73 years, male, white, stage:ia, alive, 454 days	4158.8
TCGA-XD-AAUI-01A	50 years, female, white, stage:iib, dead, 366 days	4094.1
TCGA-3A-A9I9-01A	67 years, male, white, stage:iia, dead, 634 days	4077.9
TCGA-HZ-A4BK-01A	72 years, male, white, stage:iib, alive, 657 days	4001.4
TCGA-2L-AAQJ-01A	49 years, female, white, stage:iii, dead, 394 days	3981.1
TCGA-IB-AAUQ-01A	50 years, male, white, stage:iib, dead, 183 days	3966.5
TCGA-2J-AAB1-01A	65 years, male, white, stage:iib, dead, 66 days	3898.5
TCGA-FB-AAQ6-01A	85 years, male, white, stage:ia, dead, 244 days	3882.3
TCGA-HV-AA8V-01A	50 years, male, asian, stage:iib, alive, 920 days	3855.2
TCGA-HV-A7OP-01A	72 years, male, asian, stage:iib, alive, 978 days	3829.0
TCGA-FB-AAPQ-01A	65 years, male, white, stage:iib, dead, 1130 days	3822.4
TCGA-F2-A44G-01A	79 years, female, white, stage:iib, dead, 233 days	3821.7
TCGA-HZ-A49H-01A	68 years, female, white, stage:iib, alive, 491 days	3780.4
TCGA-FB-AAQ0-01A	68 years, male, white, stage:iia, dead, 473 days	3747.5
TCGA-2J-AAB8-01A	71 years, male, white, stage:iib, alive, 80 days	3605.0
TCGA-H6-A45N-01A	88 years, female, white, stage:iib, dead, 421 days	3590.6
TCGA-XN-A8T5-01A	53 years, female, white, stage:ib, alive, 720 days	3584.7
TCGA-3A-A9I7-01A	45 years, male, black or african american, stage:iib, alive, 1323 days	3551.3
TCGA-IB-AAUO-01A	64 years, female, white, stage:iib, dead, 239 days	3545.5
TCGA-XD-AAUG-01A	66 years, female, white, stage:iv, alive, 420 days	3505.8
TCGA-IB-7649-01A	73 years, female, stage:iib, dead, 467 days	3491.1
TCGA-2J-AABA-01A	55 years, male, white, stage:iib, dead, 607 days	3470.9
TCGA-3A-A9IX-01A	40 years, male, white, stage:ia, alive, 1037 days	3397.7
TCGA-FB-A545-01A	72 years, female, white, stage:iib, dead, 732 days	3368.1
TCGA-2J-AABU-01A	56 years, male, white, stage:iib, dead, 277 days	3361.6
TCGA-US-A77E-01A	73 years, male, white, stage:iib, dead, 430 days	3341.4
TCGA-3E-AAAZ-01A	71 years, male, white, stage:iia, dead, 2182 days	3324.1
TCGA-3E-AAAY-01A	67 years, male, white, stage:iib, alive, 2285 days	3266.5
TCGA-HZ-8317-01A	69 years, female, white, stage:iib, dead, 378 days	3236.6
TCGA-US-A776-01A	61 years, male, white, stage:iia, alive, 1216 days	3200.6
TCGA-US-A77G-01A	64 years, male, white, stage:iib, dead, 12 days	3167.4
TCGA-IB-A6UF-01A	63 years, male, white, stage:iib, alive, 666 days	3140.6
TCGA-RL-AAAS-01A	60 years, female, white, stage:ib, alive, 9 days	3090.4
TCGA-HZ-8638-01A	84 years, female, white, stage:ia, dead, 151 days	3087.6
TCGA-HZ-A49G-01A	58 years, female, white, stage:iib, alive, 660 days	3074.1
TCGA-FB-AAPU-01A	41 years, female, asian, stage:iia, dead, 381 days	3061.9
TCGA-HZ-A77P-01A	77 years, male, white, stage:iib, alive, 330 days	3052.5
TCGA-F2-6880-01A	70 years, male, white, stage:iib, alive, 289 days	3050.7
TCGA-IB-8126-01A	80 years, female, white, stage:iii, alive, 462 days	2982.4
TCGA-FB-A7DR-01A	48 years, male, asian, stage:iia, dead, 353 days	2982.1
TCGA-2L-AAQI-01A	66 years, male, white, stage:iib, dead, 103 days	2976.8
TCGA-HV-A5A4-01A	72 years, female, asian, stage:iia, alive, 232 days	2959.2
TCGA-FB-AAPS-01A	62 years, female, white, stage:iib, alive, 228 days	2949.2
TCGA-HZ-7289-01A	77 years, male, white, stage:iib, dead, 661 days	2905.2
TCGA-2J-AABO-01A	43 years, male, white, stage:iib, alive, 440 days	2814.4
TCGA-IB-AAUW-01A	63 years, female, white, stage:iib, dead, 230 days	2779.8
TCGA-HZ-7923-01A	65 years, male, white, stage:iia, alive, 314 days	2735.3
TCGA-YH-A8SY-01A	73 years, female, white, alive, 388 days	2718.1
TCGA-2J-AAB4-01A	48 years, male, white, stage:iib, alive, 729 days	2688.0
TCGA-S4-A8RP-01A	77 years, female, white, stage:iib, dead, 702 days	2684.6
TCGA-FB-A4P5-01A	69 years, female, white, stage:iib, dead, 179 days	2675.1
TCGA-IB-A6UG-01A	65 years, male, white, stage:iib, dead, 41 days	2658.1
TCGA-2J-AABR-01A	60 years, female, white, stage:iia, alive, 438 days	2638.1
TCGA-PZ-A5RE-01A	44 years, female, white, stage:iib, dead, 470 days	2627.5
TCGA-IB-AAUR-01A	67 years, male, white, stage:iib, alive, 338 days	2605.4
TCGA-3A-A9IJ-01A	65 years, male, white, stage:ib, alive, 1854 days	2602.8
TCGA-S4-A8RM-01A	67 years, male, white, stage:iib, alive, 737 days	2583.7
TCGA-IB-A5SO-01A	71 years, male, white, stage:iib, dead, 365 days	2581.2
TCGA-L1-A7W4-01A	48 years, female, white, stage:iib, dead, 278 days	2561.0
TCGA-2J-AABF-01A	73 years, male, white, stage:iib, dead, 691 days	2547.9
TCGA-2J-AAB9-01A	71 years, female, white, stage:iib, dead, 627 days	2499.7
TCGA-Z5-AAPL-01A	74 years, female, white, stage:iia, alive, 467 days	2483.7
TCGA-OE-A75W-01A	75 years, male, white, stage:iia, dead, 267 days	2435.0
TCGA-XN-A8T3-01A	67 years, male, white, stage:ib, alive, 951 days	2434.7
TCGA-3A-A9IR-01A	64 years, female, white, stage:ib, alive, 1542 days	2433.7
TCGA-IB-AAUU-01A	35 years, male, white, stage:iib, alive, 245 days	2418.9
TCGA-YB-A89D-01A	59 years, male, white, stage:iib, alive, 350 days	2407.6
TCGA-RB-AA9M-01A	43 years, male, white, stage:iib, alive, 286 days	2369.2
TCGA-HZ-A4BH-01A	75 years, male, white, stage:iib, alive, 194 days	2312.0
TCGA-IB-AAUS-01A	84 years, female, white, stage:iib, alive, 225 days	2309.3
TCGA-YY-A8LH-01A	61 years, female, white, stage:iib, alive, 2016 days	2301.7
TCGA-FB-A78T-01A	71 years, female, white, stage:iib, dead, 375 days	2274.4
TCGA-IB-7654-01A	80 years, male, white, stage:iib, dead, 476 days	2264.2
TCGA-FB-A4P6-01A	54 years, male, white, stage:iib, alive, 767 days	2250.7
TCGA-IB-AAUM-01A	76 years, male, white, stage:iib, alive, 8 days	2190.3
TCGA-HZ-A77Q-01A	55 years, female, white, stage:iib, alive, 33 days	2184.9
TCGA-S4-A8RO-01A	75 years, female, white, stage:iib, alive, 525 days	2171.1
TCGA-IB-7885-01A	78 years, female, white, stage:iib, alive, 1257 days	2169.4
TCGA-IB-A5SQ-01A	56 years, female, white, stage:ib, dead, 219 days	2148.2
TCGA-3A-A9IH-01A	66 years, female, white, stage:ia, alive, 1021 days	2141.3
TCGA-HZ-8636-01A	58 years, female, white, stage:iv, dead, 545 days	2138.1
TCGA-IB-A7LX-01A	57 years, male, white, stage:iib, dead, 250 days	2133.2
TCGA-US-A77J-01A	81 years, female, white, stage:iib, dead, 568 days	2116.5
TCGA-2J-AAB6-01A	75 years, male, white, stage:iia, dead, 293 days	2096.0
TCGA-3A-A9J0-01A	75 years, male, white, stage:iib, alive, 743 days	2074.6
TCGA-US-A774-01A	76 years, female, white, stage:iib, dead, 695 days	2059.3
TCGA-IB-AAUV-01A	49 years, male, white, stage:iib, alive, 404 days	2041.2
TCGA-IB-AAUP-01A	68 years, male, white, stage:iib, alive, 431 days	2016.0
TCGA-HZ-A77O-01A	77 years, female, white, stage:iib, dead, 160 days	1998.0
TCGA-2L-AAQA-01A	76 years, male, white, stage:iib, dead, 143 days	1988.7
TCGA-LB-A8F3-01A	64 years, female, black or african american, stage:iia, alive, 379 days	1985.8
TCGA-IB-AAUT-01A	65 years, male, white, stage:iib, alive, 287 days	1960.8
TCGA-FB-A5VM-01A	74 years, male, white, stage:ib, dead, 498 days	1941.3
TCGA-3A-A9IU-01A	65 years, male, white, stage:iib, dead, 458 days	1938.8
TCGA-3A-A9I5-01A	58 years, male, white, alive, 1794 days	1929.4
TCGA-IB-AAUN-01A	74 years, female, white, stage:ib, dead, 144 days	1925.0
TCGA-3A-A9IB-01A	69 years, female, white, stage:iib, dead, 224 days	1918.4
TCGA-IB-A7M4-01A	81 years, male, white, stage:iib, alive, 483 days	1896.6
TCGA-IB-7889-01A	86 years, female, white, stage:iib, dead, 481 days	1881.6
TCGA-IB-7897-01A	54 years, female, white, stage:iib, dead, 486 days	1864.6
TCGA-HZ-7926-01A	57 years, male, black or african american, stage:iib, dead, 518 days	1857.9
TCGA-HZ-8001-01A	69 years, male, white, stage:iii, alive, 706 days	1843.5
TCGA-LB-A9Q5-01A	63 years, female, white, stage:iib, dead, 313 days	1842.8
TCGA-IB-7645-01A	44 years, female, stage:iib, dead, 1502 days	1824.3
TCGA-HV-A7OL-01A	70 years, male, asian, stage:iia, alive, 252 days	1812.1
TCGA-IB-8127-01A	59 years, male, white, stage:iib, alive, 522 days	1787.6
TCGA-IB-7651-01A	64 years, female, white, stage:iib, dead, 603 days	1779.6
TCGA-XD-AAUL-01A	56 years, male, white, stage:iia, alive, 498 days	1777.8
TCGA-2J-AABV-01A	74 years, male, white, stage:iib, dead, 652 days	1776.4
TCGA-IB-A5ST-01A	64 years, female, white, stage:iib, alive, 635 days	1763.5
TCGA-IB-7887-01A	62 years, female, white, stage:iib, dead, 110 days	1694.9
TCGA-F2-7276-01A	64 years, male, white, stage:iib, dead, 216 days	1689.9
TCGA-IB-7644-01A	65 years, female, white, stage:iv, dead, 394 days	1684.2
TCGA-HZ-7925-01A	66 years, male, white, stage:iib, dead, 614 days	1612.2
TCGA-H6-8124-01A	56 years, female, white, stage:iib, alive, 392 days	1543.5
TCGA-HZ-A49I-01A	77 years, male, white, stage:iib, dead, 308 days	1539.2
TCGA-IB-7646-01A	60 years, male, white, stage:iib, dead, 145 days	1515.8
TCGA-F2-6879-01A	57 years, male, white, stage:iib, dead, 334 days	1456.2
TCGA-HZ-7924-01A	60 years, female, white, stage:iia, alive, 840 days	1432.5
TCGA-F2-A7TX-01A	77 years, male, white, stage:iib, dead, 95 days	1427.9
TCGA-3A-A9IZ-01A	47 years, male, white, stage:iib, dead, 308 days	1379.6
TCGA-2J-AABP-01A	58 years, female, white, stage:iib, alive, 463 days	1376.5
TCGA-3A-A9IC-01A	61 years, female, white, stage:iib, dead, 738 days	1368.4
TCGA-IB-7888-01A	66 years, female, black or african american, stage:iia, dead, 1332 days	1344.7
TCGA-IB-7652-01A	49 years, female, asian, stage:iib, alive, 1116 days	1330.4
TCGA-IB-A5SS-01A	64 years, female, white, stage:iib, dead, 460 days	1180.7
TCGA-HZ-8002-01A	61 years, male, white, stage:iib, dead, 366 days	1172.7
TCGA-HZ-8003-01A	65 years, female, white, stage:iib, dead, 596 days	1089.6
TCGA-HZ-7920-01A	71 years, male, white, stage:ib, dead, 236 days	1075.9
TCGA-IB-7891-01A	49 years, female, white, stage:iib, dead, 913 days	1018.5
TCGA-IB-7890-01A	73 years, male, stage:ib, dead, 598 days	1003.7
TCGA-F2-7273-01A	54 years, male, black or african american, stage:iib, dead, 592 days	999.9
TCGA-HZ-7919-01A	52 years, female, white, stage:iib, dead, 593 days	969.5
TCGA-HZ-7922-01A	61 years, female, white, stage:iib, alive, 4 days	816.1
TCGA-HZ-7918-01A	72 years, male, white, stage:iib, alive, 969 days	769.4
TCGA-IB-7893-01A	64 years, male, white, stage:iia, dead, 117 days	700.5
TCGA-IB-7886-01A	80 years, male, white, stage:iib, dead, 123 days	681.9
TCGA-HZ-8005-01A	81 years, male, white, stage:iib, dead, 120 days	654.1
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PANCREATIC CANCER - Protein expressionⁱ

Pending cancer tissue analysis