HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.5 nTPM
HPA:35.5 nTPM
GTEx:29.7 nTPM
FANTOM5:49.9 Scaled Tags Per Million
Pig:33.1 nTPM
Mouse:45.2 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
2529 Female, age 94, left hemisphere 28.3
1911 Female, age 85, right hemisphere 27.5
2621 Female, age 67, right hemisphere 24.9
2148 Female, age 91, left hemisphere 20.4
1855 Male, age 76, left hemisphere 17.5
1898 Male, age 80, left hemisphere 16.4
Dentate gyrus
nTPM: 21.9
2530 Female, age 94, left hemisphere 29.4
2528 Male, age 74, both hemispheres 22.3
2246 Female, age 85, both hemispheres 21.8
2531 Female, age 67, both hemispheres 20.5
1927 Female, age 91, both hemispheres 20.4
2010 Male, age 76, both hemispheres 17.1
Entorhinal gyrus
nTPM: 35.5
1938 Female, age 85, left hemisphere 44.6
2117 Female, age 91, right hemisphere 36.9
2764 Male, age 80, right hemisphere 36.5
1787 Male, age 76, left hemisphere 35.6
2613 Female, age 94, left hemisphere 33.4
2686 Male, age 75, right hemisphere 26.0
Hippocampus, CA1
nTPM: 20.0
2527 Male, age 74, both hemispheres 24.9
2045 Male, age 76, both hemispheres 20.0
2082 Female, age 91, right hemisphere 18.8
1873 Female, age 85, both hemispheres 18.7
2749 Male, age 80, left hemisphere 17.5
Hippocampus, CA2
nTPM: 24.2
2249 Male, age 74, both hemispheres 30.3
2437 Female, age 94, left hemisphere 25.3
1940 Female, age 85, left hemisphere 23.8
1963 Male, age 80, left hemisphere 23.4
2113 Female, age 91, right hemisphere 22.3
1892 Male, age 76, both hemispheres 19.8
Hippocampus, CA3
nTPM: 20.9
1891 Female, age 85, both hemispheres 33.0
1867 Male, age 76, both hemispheres 27.7
2436 Male, age 74, both hemispheres 19.9
2137 Male, age 80, left hemisphere 16.4
2620 Female, age 94, left hemisphere 14.7
2861 Female, age 67, both hemispheres 13.6
Parahippocampal cortex
nTPM: 28.5
1990 Female, age 91, right hemisphere 36.8
2532 Female, age 72, left hemisphere 36.5
2692 Male, age 74, both hemispheres 33.8
1850 Male, age 80, both hemispheres 32.7
1933 Female, age 85, both hemispheres 31.3
2245 Female, age 91, both hemispheres 26.5
2250 Female, age 67, right hemisphere 23.0
2693 Female, age 94, both hemispheres 22.6
2622 Female, age 67, right hemisphere 21.7
2018 Male, age 76, both hemispheres 20.2
Perirhinal gyrus
nTPM: 28.0
1841 Female, age 85, right hemisphere 31.2
1847 Female, age 91, left hemisphere 28.8
2848 Male, age 76, right hemisphere 28.5
1794 Male, age 80, right hemisphere 26.7
2521 Female, age 94, right hemisphere 24.7
Subiculum
nTPM: 31.2
1977 Female, age 85, both hemispheres 38.2
1901 Male, age 80, both hemispheres 35.6
2438 Female, age 94, left hemisphere 35.3
2042 Male, age 76, both hemispheres 31.5
2619 Male, age 74, both hemispheres 28.6
2729 Female, age 91, right hemisphere 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.7
Samples: 197

Max nTPM: 66.2
Min nTPM: 4.2
Std nTPM: 12.8
Median nTPM: 27.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 66.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 62.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 62.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 61.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 58.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 55.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 54.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 53.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 53.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.9
FF:10153-102I9 76 years, female 67.3
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 31.5
Min nTPM: 18.0
Sample A Female 21.6
Sample B Female 18.0
Sample C Male 31.5
Sample D Male 19.8
Entorhinal cortex
nTPM: 33.1
Samples: 4

Max nTPM: 36.8
Min nTPM: 29.5
Sample A Female 29.5
Sample B Female 36.8
Sample C Male 35.8
Sample D Male 30.1
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 35.2
Min nTPM: 24.1
Sample A Female 35.2
Sample B Female 27.8
Sample C Male 25.1
Sample D Male 24.1
Ventral hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 14.5
Sample A Female 14.5
Sample B Female 17.1
Sample C Male 20.3
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.2
Samples: 4

Max nTPM: 51.6
Min nTPM: 36.8
Sample A Male 51.6
Sample B Male 47.8
Sample C Female 36.8
Sample D Female 44.4
Hippocampal formation
nTPM: 27.0
Samples: 4

Max nTPM: 33.2
Min nTPM: 22.3
Sample A Male 33.2
Sample B Male 26.4
Sample C Female 22.3
Sample D Female 26.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
81671346 Antisense, RP_081002_02_D05, Mouse strain C57BL/6J (56 days, male) 3.3
539 Antisense, RP_Baylor_103328, Mouse strain C57BL/6J (56 days, male) 1.2

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