HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:4.5 nTPM
HPA:4.5 nTPM
GTEx:4.5 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:36.9 nTPM
Mouse:24.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027307
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.5
Sample id Sample description nTPM
Hippocampus
nTPM: 3.9
1855 Male, age 76, left hemisphere 5.1
1911 Female, age 85, right hemisphere 4.9
2529 Female, age 94, left hemisphere 3.9
1898 Male, age 80, left hemisphere 3.7
2148 Female, age 91, left hemisphere 3.2
2621 Female, age 67, right hemisphere 2.7
Dentate gyrus
nTPM: 4.1
1927 Female, age 91, both hemispheres 5.1
2010 Male, age 76, both hemispheres 5.1
2528 Male, age 74, both hemispheres 4.9
2246 Female, age 85, both hemispheres 3.8
2530 Female, age 94, left hemisphere 3.0
2531 Female, age 67, both hemispheres 2.9
Entorhinal gyrus
nTPM: 3.8
1787 Male, age 76, left hemisphere 4.9
1938 Female, age 85, left hemisphere 4.8
2117 Female, age 91, right hemisphere 3.4
2613 Female, age 94, left hemisphere 3.4
2764 Male, age 80, right hemisphere 3.1
2686 Male, age 75, right hemisphere 2.9
Hippocampus, CA1
nTPM: 4.4
1873 Female, age 85, both hemispheres 5.0
2045 Male, age 76, both hemispheres 4.9
2749 Male, age 80, left hemisphere 4.9
2527 Male, age 74, both hemispheres 3.7
2082 Female, age 91, right hemisphere 3.5
Hippocampus, CA2
nTPM: 4.0
1963 Male, age 80, left hemisphere 4.9
2113 Female, age 91, right hemisphere 4.8
1892 Male, age 76, both hemispheres 4.0
2437 Female, age 94, left hemisphere 3.8
1940 Female, age 85, left hemisphere 3.4
2249 Male, age 74, both hemispheres 3.3
Hippocampus, CA3
nTPM: 3.7
1891 Female, age 85, both hemispheres 5.3
2137 Male, age 80, left hemisphere 4.4
2436 Male, age 74, both hemispheres 3.8
1867 Male, age 76, both hemispheres 3.7
2620 Female, age 94, left hemisphere 3.0
2861 Female, age 67, both hemispheres 2.0
Parahippocampal cortex
nTPM: 4.3
2693 Female, age 94, both hemispheres 5.5
2018 Male, age 76, both hemispheres 5.0
1933 Female, age 85, both hemispheres 4.8
1850 Male, age 80, both hemispheres 4.7
2532 Female, age 72, left hemisphere 4.5
1990 Female, age 91, right hemisphere 4.3
2692 Male, age 74, both hemispheres 4.0
2245 Female, age 91, both hemispheres 3.7
2250 Female, age 67, right hemisphere 3.4
2622 Female, age 67, right hemisphere 3.1
Perirhinal gyrus
nTPM: 4.5
1794 Male, age 80, right hemisphere 4.9
1841 Female, age 85, right hemisphere 4.7
2521 Female, age 94, right hemisphere 4.6
1847 Female, age 91, left hemisphere 4.4
2848 Male, age 76, right hemisphere 4.2
Subiculum
nTPM: 4.3
2042 Male, age 76, both hemispheres 4.8
2438 Female, age 94, left hemisphere 4.8
1977 Female, age 85, both hemispheres 4.2
2729 Female, age 91, right hemisphere 4.1
1901 Male, age 80, both hemispheres 4.0
2619 Male, age 74, both hemispheres 3.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.5
Samples: 197

Max nTPM: 19.5
Min nTPM: 0.3
Std nTPM: 2.4
Median nTPM: 4.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 11.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 11.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 10.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 9.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 9.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 9.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 9.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 8.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 8.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.9
Samples: 4

Max nTPM: 42.9
Min nTPM: 29.9
Sample A Female 42.9
Sample B Female 36.1
Sample C Male 29.9
Sample D Male 38.7
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 37.0
Min nTPM: 26.2
Sample A Female 27.8
Sample B Female 37.0
Sample C Male 31.6
Sample D Male 26.2
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 36.5
Min nTPM: 25.9
Sample A Female 36.5
Sample B Female 27.9
Sample C Male 25.9
Sample D Male 29.2
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 39.4
Min nTPM: 22.4
Sample A Female 30.8
Sample B Female 28.8
Sample C Male 22.4
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 23.6
Min nTPM: 19.3
Sample A Male 20.8
Sample B Male 21.3
Sample C Female 23.6
Sample D Female 19.3
Hippocampal formation
nTPM: 24.1
Samples: 4

Max nTPM: 28.8
Min nTPM: 22.1
Sample A Male 28.8
Sample B Male 23.2
Sample C Female 22.2
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68920803 Antisense, RP_050303_01_C04, Mouse strain C57BL/6J (56 days, male) 0.9

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