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MT-ND3
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:89729.0 nTPM
HPA:89729.0 nTPM
Pig:17697.2 nTPM
Allen mouse:0.2 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 89729.0
Sample id Sample description nTPM
Area postrema
nTPM: 85947.3
2799 Male, age 61, both hemispheres 89426.7
2306 Male, age 80, both hemispheres 88886.3
2054 Male, age 76, both hemispheres 79528.9
Cuneate nuclei
nTPM: 83841.6
2381 Male, age 80, both hemispheres 94083.4
2131 Male, age 76, both hemispheres 81106.5
2376 Male, age 61, both hemispheres 76334.8
Dorsal medullary reticular nucleus
nTPM: 75031.3
2373 Male, age 61, both hemispheres 79108.3
2088 Male, age 76, both hemispheres 74970.0
2040 Female, age 85, both hemispheres 71015.5
Dorsal motor vagal complex
nTPM: 84753.8
2797 Male, age 61, both hemispheres 108098.1
2807 Female, age 85, both hemispheres 97531.4
2185 Male, age 76, both hemispheres 86407.5
2643 Male, age 74, both hemispheres 84649.4
2813 Female, age 72, unknown 82586.3
2844 Male, age 55, unknown 73758.8
2133 Female, age 91, both hemispheres 73169.5
2000 Male, age 74, unknown 71829.9
Gigantocellular reticular nuclei, medullary
nTPM: 78328.9
2387 Female, age 91, both hemispheres 85403.8
2310 Male, age 80, both hemispheres 85297.0
2314 Male, age 61, both hemispheres 85255.0
2022 Male, age 76, right hemisphere 72783.9
2462 Male, age 74, both hemispheres 71871.9
1876 Female, age 85, both hemispheres 69362.1
Gigantocellular reticular nuclei, pars
nTPM: 86971.8
2330 Male, age 80, both hemispheres 102865.7
2706 Male, age 80, both hemispheres 102312.2
2336 Male, age 61, both hemispheres 80697.2
2168 Male, age 76, both hemispheres 75295.6
2084 Female, age 85, both hemispheres 73688.5
Inferior olive
nTPM: 84546.1
2628 Female, age 91, both hemispheres 108140.6
2379 Male, age 80, both hemispheres 87846.7
2178 Male, age 61, both hemispheres 77373.8
2085 Female, age 85, both hemispheres 77325.7
2563 Male, age 74, both hemispheres 72043.8
Lateral medullary reticular nucleus
nTPM: 76898.0
2374 Male, age 61, both hemispheres 87634.8
2804 Female, age 91, both hemispheres 87291.7
2190 Female, age 85, both hemispheres 77407.7
2044 Male, age 76, both hemispheres 72537.9
2852 Male, age 80, both hemispheres 69089.2
2305 Male, age 74, both hemispheres 67426.7
Medial vestibular nucleus
nTPM: 79868.2
2624 Male, age 61, both hemispheres 99272.4
2803 Female, age 91, both hemispheres 83388.9
2134 Male, age 76, both hemispheres 77327.5
2801 Male, age 74, both hemispheres 76309.0
2093 Male, age 80, both hemispheres 73162.5
2743 Female, age 85, both hemispheres 69749.0
Motor hypoglossal nucleus
nTPM: 78327.4
2461 Male, age 61, both hemispheres 93986.6
2132 Female, age 85, both hemispheres 79521.7
2182 Male, age 80, both hemispheres 78467.3
2125 Female, age 91, both hemispheres 70802.9
2277 Male, age 76, both hemispheres 68858.6
Nucleus ambiguus
nTPM: 67288.9
2071 Male, age 76, both hemispheres 67965.9
2096 Female, age 85, both hemispheres 66611.9
Nucleus cuneatus
nTPM: 89729.0
2805 Female, age 91, both hemispheres 118937.3
2808 Female, age 85, both hemispheres 94608.0
2562 Male, age 61, both hemispheres 85032.6
2380 Male, age 80, both hemispheres 84357.5
2100 Male, age 76, both hemispheres 79558.5
2564 Male, age 74, both hemispheres 75880.1
Nucleus gracilis
nTPM: 88155.9
2382 Male, age 80, both hemispheres 93947.1
2299 Female, age 85, both hemispheres 93582.4
2627 Male, age 74, both hemispheres 76938.2
Nucleus raphe magnus
nTPM: 78738.2
2328 Male, age 80, both hemispheres 86522.3
2172 Female, age 85, both hemispheres 83145.0
2459 Female, age 91, both hemispheres 82571.9
2051 Male, age 76, both hemispheres 75732.9
2455 Male, age 74, both hemispheres 73716.4
2160 Male, age 61, both hemispheres 70740.9
Nucleus raphe obscurus
nTPM: 72634.0
2845 Female, age 85, midline 76514.4
2800 Male, age 61, midline 74189.6
2142 Male, age 76, midline 67198.0
Nucleus raphe pallidus
nTPM: 70020.9
2183 Male, age 80, midline 73961.9
2145 Male, age 76, midline 69290.4
1924 Male, age 61, midline 66810.5
Nucleus tractus solitarii
nTPM: 77578.6
2191 Female, age 85, both hemispheres 85069.7
2307 Male, age 80, both hemispheres 81749.3
2656 Male, age 76, both hemispheres 73805.0
2144 Female, age 91, right hemisphere 69690.4
Parvicellular reticular nuclei
nTPM: 73078.5
2095 Male, age 76, both hemispheres 74752.4
2558 Male, age 74, both hemispheres 74664.9
2119 Male, age 80, both hemispheres 69818.0
Parvicellular reticular nuclei, medullary
nTPM: 77465.0
2181 Male, age 80, left hemisphere 83326.1
2189 Female, age 91, both hemispheres 75952.1
2091 Female, age 85, both hemispheres 73116.8
Peritrigeminal nucleus
nTPM: 70782.6
2136 Male, age 76, both hemispheres 73111.3
2179 Male, age 61, both hemispheres 70962.3
2067 Female, age 85, both hemispheres 68274.2
Prepositus hypoglossal nucleus
nTPM: 75712.5
2855 Female, age 85, right hemisphere 79491.5
2086 Male, age 80, both hemispheres 71933.5
Spinal trigeminal nucleus, caudal
nTPM: 81126.8
2390 Female, age 91, both hemispheres 91629.5
2308 Male, age 80, both hemispheres 84465.3
2642 Male, age 74, both hemispheres 77859.5
2447 Male, age 76, both hemispheres 76476.1
2312 Male, age 61, both hemispheres 75203.5
Spinal trigeminal nucleus, interpolar
nTPM: 78977.9
2625 Male, age 61, both hemispheres 92464.8
2389 Female, age 91, both hemispheres 88677.4
2386 Female, age 85, both hemispheres 72184.1
2033 Male, age 80, both hemispheres 71160.6
2066 Male, age 76, right hemisphere 70402.4
Spinal vestibular nucleus
nTPM: 77537.2
2796 Male, age 61, both hemispheres 90178.8
2806 Female, age 85, both hemispheres 82770.5
2186 Female, age 91, both hemispheres 75825.6
2384 Male, age 74, both hemispheres 72526.6
2780 Male, age 80, both hemispheres 72071.5
2748 Male, age 76, both hemispheres 71850.2
Ventral medullary reticular nucleus
nTPM: 74944.3
2372 Male, age 61, both hemispheres 78279.6
2060 Male, age 76, both hemispheres 71609.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 74113.7
2302 Female, age 91, both hemispheres 81268.5
2180 Male, age 61, both hemispheres 77355.9
2118 Male, age 80, both hemispheres 71765.2
1986 Male, age 76, both hemispheres 70136.3
2741 Female, age 85, both hemispheres 70042.4

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 17697.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 17697.2
Samples: 4

Max nTPM: 20004.3
Min nTPM: 13622.8
Sample A Female 20004.3
Sample B Female 17698.1
Sample C Male 19463.6
Sample D Male 13622.8

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
73949734 Antisense, RP_051219_02_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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