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MT-ATP6
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:87375.8 nTPM
HPA:87375.8 nTPM
Pig:32188.9 nTPM
Allen mouse:22.2 Expression energy

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - HPA Brain RNA-seq
Max nTPM 87375.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 76349.5
2301 Female, age 85, both hemispheres 99589.3
2188 Female, age 91, both hemispheres 71674.6
1984 Male, age 76, both hemispheres 69285.1
2090 Male, age 80, both hemispheres 64848.8
Dorsal cochlear nucleus
nTPM: 78963.0
2378 Male, age 80, both hemispheres 95363.2
2802 Male, age 74, right hemisphere 84466.0
2187 Female, age 91, both hemispheres 72022.0
2370 Male, age 61, both hemispheres 71534.3
2058 Male, age 76, both hemispheres 71429.5
Dorsal tegmental nucleus
nTPM: 74818.5
2358 Male, age 61, both hemispheres 90799.9
1936 Male, age 76, left hemisphere 71108.4
2083 Male, age 80, both hemispheres 69613.3
2326 Male, age 74, both hemispheres 67752.2
Dorsolateral tegmental area
nTPM: 68146.1
2141 Male, age 76, both hemispheres 76200.2
2337 Male, age 61, both hemispheres 71438.1
2654 Male, age 80, both hemispheres 69675.2
2751 Female, age 85, both hemispheres 62549.4
2360 Male, age 74, both hemispheres 60867.6
Kolliker-Fuse nucleus
nTPM: 75187.1
2793 Female, age 91, left hemisphere 92550.1
2163 Male, age 80, both hemispheres 72850.8
2315 Male, age 76, right hemisphere 60160.3
Lateral lemniscal nuclei
nTPM: 72715.2
2320 Female, age 91, left hemisphere 84648.8
2453 Male, age 74, right hemisphere 76926.3
2169 Male, age 76, both hemispheres 76820.1
2036 Male, age 80, both hemispheres 65600.9
2746 Female, age 85, left hemisphere 59580.2
Lateral parabrachial nucleus
nTPM: 67060.9
2790 Male, age 61, both hemispheres 72304.6
2792 Male, age 76, both hemispheres 70596.8
2139 Female, age 85, right hemisphere 63933.4
2013 Male, age 80, both hemispheres 61409.0
Lateral vestibular nucleus
nTPM: 83137.7
2184 Male, age 76, both hemispheres 85762.6
2311 Male, age 80, both hemispheres 80512.8
Locus coeruleus
nTPM: 71815.1
2720 Male, age 74, both hemispheres 89705.5
2162 Male, age 80, both hemispheres 78061.4
2788 Male, age 74, unknown 70600.6
2317 Female, age 72, unknown 68598.1
1980 Male, age 76, both hemispheres 66824.9
2014 Male, age 55, unknown 66335.8
2123 Female, age 91, both hemispheres 62579.6
Medial olivary nucleus
nTPM: 66375.3
2851 Male, age 80, both hemispheres 84182.0
2138 Female, age 91, both hemispheres 63290.8
1962 Male, age 76, both hemispheres 59890.7
1943 Male, age 61, both hemispheres 58137.7
Medial parabrachial nucleus
nTPM: 70700.8
2854 Male, age 80, both hemispheres 82130.9
2786 Male, age 76, both hemispheres 75315.5
2156 Male, age 61, both hemispheres 72195.4
2170 Female, age 91, both hemispheres 66191.4
2463 Female, age 85, right hemisphere 57670.6
Medial periolivary nuclei
nTPM: 70990.7
2458 Female, age 91, both hemispheres 89112.0
2171 Female, age 85, both hemispheres 74622.3
2063 Male, age 76, both hemispheres 65322.7
2791 Male, age 74, right hemisphere 63029.1
2081 Male, age 80, both hemispheres 62867.5
Motor facial nucleus
nTPM: 84778.7
2795 Female, age 91, both hemispheres 115366.3
2697 Female, age 85, both hemispheres 99662.6
2327 Male, age 80, both hemispheres 96718.3
2365 Male, age 74, right hemisphere 66693.3
2062 Male, age 76, both hemispheres 65969.2
2126 Male, age 61, both hemispheres 64262.4
Motor trigeminal nucleus
nTPM: 74624.9
2321 Female, age 91, both hemispheres 88275.0
2309 Male, age 76, both hemispheres 73666.7
2560 Male, age 74, both hemispheres 72516.7
2335 Male, age 61, both hemispheres 72332.9
2079 Male, age 80, both hemispheres 66333.2
Nuclei of the trapezoid body
nTPM: 71827.1
2368 Female, age 91, both hemispheres 87773.2
2166 Male, age 80, both hemispheres 74196.4
1983 Male, age 76, both hemispheres 68147.0
2159 Male, age 61, both hemispheres 64872.5
2735 Female, age 85, both hemispheres 64146.7
Paramedian reticular nucleus
nTPM: 68162.5
2313 Male, age 61, both hemispheres 73429.7
2050 Female, age 85, both hemispheres 69773.8
2052 Male, age 76, both hemispheres 67768.1
2057 Male, age 80, both hemispheres 61678.5
Pontine nuclei
nTPM: 65106.2
2319 Female, age 91, both hemispheres 75141.7
2787 Female, age 85, both hemispheres 70026.7
2115 Male, age 80, left hemisphere 65507.8
2454 Male, age 74, left hemisphere 65136.0
1863 Male, age 55, unknown 63721.8
1968 Male, age 76, left hemisphere 63424.9
2109 Female, age 72, unknown 59908.3
2727 Male, age 61, right hemisphere 57982.6
Pontine raphe nucleus
nTPM: 71355.1
2853 Male, age 76, midline 76728.4
2122 Female, age 85, midline 65981.7
Posteroventral cochlear nucleus
nTPM: 68125.6
2341 Male, age 80, both hemispheres 76152.6
2371 Male, age 61, both hemispheres 72900.1
2752 Female, age 85, both hemispheres 66059.5
2135 Female, age 91, both hemispheres 62926.3
2070 Male, age 76, both hemispheres 62589.5
Principal sensory trigeminal nucleus
nTPM: 77699.0
2324 Male, age 76, both hemispheres 99505.2
2367 Female, age 91, left hemisphere 83996.7
2158 Male, age 61, both hemispheres 64396.1
2008 Male, age 80, left hemisphere 62897.8
Reticular pontine nucleus, caudal
nTPM: 78504.9
2332 Male, age 80, right hemisphere 94457.4
2457 Female, age 91, both hemispheres 85861.1
2559 Male, age 74, both hemispheres 67944.9
2092 Male, age 76, both hemispheres 65756.3
Reticular pontine nucleus, oral
nTPM: 71333.7
2366 Female, age 91, both hemispheres 91681.9
2167 Male, age 76, both hemispheres 74860.6
1939 Male, age 80, both hemispheres 65405.8
2012 Female, age 85, both hemispheres 62630.4
2361 Male, age 74, both hemispheres 62089.9
Reticulotegmental nucleus
nTPM: 87375.8
2322 Female, age 91, both hemispheres 95910.1
2333 Male, age 80, both hemispheres 91081.7
2325 Male, age 76, both hemispheres 85379.3
2452 Male, age 74, both hemispheres 77132.0
Spinal trigeminal nucleus, oral
nTPM: 74425.1
2164 Male, age 80, both hemispheres 89959.3
1978 Male, age 76, both hemispheres 69327.5
2737 Female, age 85, both hemispheres 63988.5
Subcoeruleus area
nTPM: 68296.1
2323 Female, age 91, left hemisphere 73434.1
2451 Male, age 74, both hemispheres 70578.3
1958 Male, age 80, both hemispheres 69078.5
2089 Male, age 76, left hemisphere 66506.1
2369 Female, age 85, left hemisphere 61883.3
Superior olive
nTPM: 74489.9
2561 Female, age 91, both hemispheres 96827.4
2329 Male, age 80, right hemisphere 88496.8
2020 Male, age 76, both hemispheres 63520.0
1875 Female, age 85, both hemispheres 62386.9
2364 Male, age 74, right hemisphere 61218.4
Superior vestibular nucleus
nTPM: 64840.5
2061 Male, age 76, both hemispheres 66368.2
2015 Male, age 80, both hemispheres 64621.3
2383 Male, age 74, both hemispheres 63532.0
Ventral periolivary nuclei
nTPM: 74489.9
2794 Female, age 91, left hemisphere 89987.0
2165 Male, age 80, both hemispheres 77814.9
2130 Female, age 85, both hemispheres 69555.6
2023 Male, age 76, both hemispheres 60602.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 77425.7
2840 Female, age 85, both hemispheres 87059.4
2456 Female, age 91, both hemispheres 84495.2
2359 Male, age 61, both hemispheres 79823.5
2161 Male, age 80, both hemispheres 75161.6
2449 Male, age 74, both hemispheres 69270.5
1959 Male, age 76, both hemispheres 68744.2

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 32188.9
Pig sample Sample description nTPM
Pons
nTPM: 32189.0
Samples: 4

Max nTPM: 37938.4
Min nTPM: 22169.2
Sample A Female 37938.4
Sample B Female 22169.2
Sample C Male 34183.5
Sample D Male 34464.7

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 22.2
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 22.2
74357755 Antisense, RP_051219_04_A04, Mouse strain C57BL/6J (56 days, male) 22.2

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