HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.8 nTPM
HPA:22.8 nTPM
GTEx:22.8 nTPM
FANTOM5:47.4 Scaled Tags Per Million
Pig:36.3 nTPM
Mouse:192.9 nTPM
Allen mouse:28.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000161
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
2621 Female, age 67, right hemisphere 17.3
1898 Male, age 80, left hemisphere 16.5
2148 Female, age 91, left hemisphere 15.5
2529 Female, age 94, left hemisphere 12.6
1855 Male, age 76, left hemisphere 11.4
1911 Female, age 85, right hemisphere 11.2
Dentate gyrus
nTPM: 14.8
1927 Female, age 91, both hemispheres 19.3
2531 Female, age 67, both hemispheres 19.3
2246 Female, age 85, both hemispheres 15.8
2528 Male, age 74, both hemispheres 13.1
2010 Male, age 76, both hemispheres 12.3
2530 Female, age 94, left hemisphere 9.1
Entorhinal gyrus
nTPM: 17.7
2764 Male, age 80, right hemisphere 20.6
2686 Male, age 75, right hemisphere 20.2
1938 Female, age 85, left hemisphere 19.3
2613 Female, age 94, left hemisphere 18.8
1787 Male, age 76, left hemisphere 17.5
2117 Female, age 91, right hemisphere 10.0
Hippocampus, CA1
nTPM: 17.5
2749 Male, age 80, left hemisphere 24.5
2527 Male, age 74, both hemispheres 17.4
1873 Female, age 85, both hemispheres 16.6
2082 Female, age 91, right hemisphere 14.6
2045 Male, age 76, both hemispheres 14.2
Hippocampus, CA2
nTPM: 14.7
1892 Male, age 76, both hemispheres 23.1
2113 Female, age 91, right hemisphere 14.1
1963 Male, age 80, left hemisphere 13.6
2249 Male, age 74, both hemispheres 13.3
1940 Female, age 85, left hemisphere 12.5
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 23.1
2620 Female, age 94, left hemisphere 20.3
1867 Male, age 76, both hemispheres 17.8
2861 Female, age 67, both hemispheres 17.7
1891 Female, age 85, both hemispheres 14.2
2436 Male, age 74, both hemispheres 14.0
Parahippocampal cortex
nTPM: 19.3
1850 Male, age 80, both hemispheres 23.6
2245 Female, age 91, both hemispheres 22.3
2622 Female, age 67, right hemisphere 21.9
1990 Female, age 91, right hemisphere 20.9
2693 Female, age 94, both hemispheres 20.7
2250 Female, age 67, right hemisphere 19.9
1933 Female, age 85, both hemispheres 18.8
2532 Female, age 72, left hemisphere 17.9
2692 Male, age 74, both hemispheres 15.1
2018 Male, age 76, both hemispheres 12.2
Perirhinal gyrus
nTPM: 22.8
1847 Female, age 91, left hemisphere 28.0
1841 Female, age 85, right hemisphere 24.0
1794 Male, age 80, right hemisphere 21.2
2521 Female, age 94, right hemisphere 20.5
2848 Male, age 76, right hemisphere 20.2
Subiculum
nTPM: 14.1
1977 Female, age 85, both hemispheres 18.8
1901 Male, age 80, both hemispheres 18.1
2619 Male, age 74, both hemispheres 14.6
2438 Female, age 94, left hemisphere 12.8
2729 Female, age 91, right hemisphere 10.2
2042 Male, age 76, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.8
Samples: 197

Max nTPM: 55.4
Min nTPM: 7.4
Std nTPM: 9.9
Median nTPM: 20.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 55.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 47.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 45.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 44.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 44.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 43.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 43.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 43.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 42.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.4
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 25.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 31.8
Min nTPM: 16.0
Sample A Female 25.4
Sample B Female 28.2
Sample C Male 31.8
Sample D Male 16.0
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 31.1
Min nTPM: 29.3
Sample A Female 29.3
Sample B Female 30.3
Sample C Male 31.1
Sample D Male 29.8
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 47.3
Min nTPM: 26.8
Sample A Female 47.3
Sample B Female 33.0
Sample C Male 38.3
Sample D Male 26.8
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 39.3
Min nTPM: 25.7
Sample A Female 30.3
Sample B Female 25.7
Sample C Male 39.3
Sample D Male 30.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 192.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 192.9
Samples: 4

Max nTPM: 240.9
Min nTPM: 174.3
Sample A Male 177.6
Sample B Male 178.7
Sample C Female 174.3
Sample D Female 240.9
Hippocampal formation
nTPM: 153.1
Samples: 4

Max nTPM: 174.1
Min nTPM: 141.0
Sample A Male 141.0
Sample B Male 174.1
Sample C Female 155.3
Sample D Female 141.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 28.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 28.9
67765726 Antisense, RP_040916_01_F11, Mouse strain C57BL/6J (56 days, male) 32.8
70743888 Antisense, RP_050725_01_H12, Mouse strain C57BL/6J (56 days, male) 24.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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