HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.0 nTPM
HPA:49.0 nTPM
GTEx:26.0 nTPM
FANTOM5:10.6 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:3.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045215
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.0
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1898 Male, age 80, left hemisphere 51.1
2529 Female, age 94, left hemisphere 50.0
2148 Female, age 91, left hemisphere 49.2
1855 Male, age 76, left hemisphere 48.1
2621 Female, age 67, right hemisphere 48.1
1911 Female, age 85, right hemisphere 47.7
Dentate gyrus
nTPM: 48.4
2530 Female, age 94, left hemisphere 49.3
2528 Male, age 74, both hemispheres 49.1
2531 Female, age 67, both hemispheres 49.0
1927 Female, age 91, both hemispheres 47.8
2010 Male, age 76, both hemispheres 47.6
2246 Female, age 85, both hemispheres 47.5
Entorhinal gyrus
nTPM: 48.7
2117 Female, age 91, right hemisphere 49.5
1787 Male, age 76, left hemisphere 49.3
2613 Female, age 94, left hemisphere 49.0
1938 Female, age 85, left hemisphere 48.7
2764 Male, age 80, right hemisphere 48.2
2686 Male, age 75, right hemisphere 47.6
Hippocampus, CA1
nTPM: 47.6
2527 Male, age 74, both hemispheres 48.8
1873 Female, age 85, both hemispheres 48.3
2082 Female, age 91, right hemisphere 47.5
2749 Male, age 80, left hemisphere 47.1
2045 Male, age 76, both hemispheres 46.4
Hippocampus, CA2
nTPM: 48.0
1963 Male, age 80, left hemisphere 49.6
2249 Male, age 74, both hemispheres 49.0
2437 Female, age 94, left hemisphere 47.7
2113 Female, age 91, right hemisphere 47.5
1940 Female, age 85, left hemisphere 47.3
1892 Male, age 76, both hemispheres 46.8
Hippocampus, CA3
nTPM: 48.0
2620 Female, age 94, left hemisphere 49.2
2436 Male, age 74, both hemispheres 48.4
2861 Female, age 67, both hemispheres 48.2
1891 Female, age 85, both hemispheres 47.5
2137 Male, age 80, left hemisphere 47.5
1867 Male, age 76, both hemispheres 47.1
Parahippocampal cortex
nTPM: 48.3
1933 Female, age 85, both hemispheres 49.8
2692 Male, age 74, both hemispheres 49.4
2532 Female, age 72, left hemisphere 48.6
2622 Female, age 67, right hemisphere 48.6
1850 Male, age 80, both hemispheres 48.4
2250 Female, age 67, right hemisphere 48.0
2018 Male, age 76, both hemispheres 47.7
2245 Female, age 91, both hemispheres 47.7
1990 Female, age 91, right hemisphere 47.6
2693 Female, age 94, both hemispheres 47.5
Perirhinal gyrus
nTPM: 47.8
1794 Male, age 80, right hemisphere 49.2
2848 Male, age 76, right hemisphere 48.0
1847 Female, age 91, left hemisphere 47.8
1841 Female, age 85, right hemisphere 47.3
2521 Female, age 94, right hemisphere 46.6
Subiculum
nTPM: 48.5
2619 Male, age 74, both hemispheres 50.5
2729 Female, age 91, right hemisphere 49.6
1901 Male, age 80, both hemispheres 48.8
2042 Male, age 76, both hemispheres 48.7
1977 Female, age 85, both hemispheres 48.1
2438 Female, age 94, left hemisphere 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 55.9
Min nTPM: 13.4
Std nTPM: 7.6
Median nTPM: 24.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 51.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 50.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 49.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 44.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 41.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 41.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.6
FF:10153-102I9 76 years, female 11.7
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 39.2
Min nTPM: 24.3
Sample A Female 39.2
Sample B Female 33.5
Sample C Male 24.3
Sample D Male 30.4
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 28.3
Min nTPM: 24.1
Sample A Female 24.1
Sample B Female 28.3
Sample C Male 26.3
Sample D Male 26.4
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 24.0
Sample A Female 25.7
Sample B Female 25.0
Sample C Male 24.0
Sample D Male 24.1
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.9
Sample A Female 32.0
Sample B Female 27.7
Sample C Male 26.0
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 2.7
Sample C Female 3.4
Sample D Female 2.9
Hippocampal formation
nTPM: 3.7
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.2
Sample A Male 3.2
Sample B Male 3.8
Sample C Female 4.2
Sample D Female 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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