HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:42.0 nTPM
HPA:42.0 nTPM
GTEx:33.7 nTPM
FANTOM5:78.6 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:24.2 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.1
2529 Female, age 94, left hemisphere 42.8
2148 Female, age 91, left hemisphere 41.3
1855 Male, age 76, left hemisphere 40.2
2621 Female, age 67, right hemisphere 38.9
1911 Female, age 85, right hemisphere 38.8
1898 Male, age 80, left hemisphere 38.4
Dentate gyrus
nTPM: 39.5
2530 Female, age 94, left hemisphere 42.1
2528 Male, age 74, both hemispheres 41.9
2246 Female, age 85, both hemispheres 39.2
2531 Female, age 67, both hemispheres 39.0
2010 Male, age 76, both hemispheres 38.2
1927 Female, age 91, both hemispheres 36.6
Entorhinal gyrus
nTPM: 42.0
2764 Male, age 80, right hemisphere 45.2
2686 Male, age 75, right hemisphere 42.9
2613 Female, age 94, left hemisphere 42.8
1938 Female, age 85, left hemisphere 40.5
1787 Male, age 76, left hemisphere 40.2
2117 Female, age 91, right hemisphere 40.1
Hippocampus, CA1
nTPM: 39.4
2749 Male, age 80, left hemisphere 41.4
2527 Male, age 74, both hemispheres 40.4
2082 Female, age 91, right hemisphere 40.0
2045 Male, age 76, both hemispheres 37.6
1873 Female, age 85, both hemispheres 37.5
Hippocampus, CA2
nTPM: 40.4
1940 Female, age 85, left hemisphere 41.7
1963 Male, age 80, left hemisphere 41.7
2113 Female, age 91, right hemisphere 40.7
2437 Female, age 94, left hemisphere 40.5
2249 Male, age 74, both hemispheres 39.5
1892 Male, age 76, both hemispheres 38.0
Hippocampus, CA3
nTPM: 40.1
2861 Female, age 67, both hemispheres 41.4
2436 Male, age 74, both hemispheres 41.3
2137 Male, age 80, left hemisphere 40.8
1891 Female, age 85, both hemispheres 39.8
2620 Female, age 94, left hemisphere 39.4
1867 Male, age 76, both hemispheres 37.9
Parahippocampal cortex
nTPM: 39.9
2692 Male, age 74, both hemispheres 43.5
2622 Female, age 67, right hemisphere 41.9
2532 Female, age 72, left hemisphere 41.4
1850 Male, age 80, both hemispheres 40.7
1933 Female, age 85, both hemispheres 39.8
1990 Female, age 91, right hemisphere 39.6
2018 Male, age 76, both hemispheres 39.2
2245 Female, age 91, both hemispheres 39.2
2693 Female, age 94, both hemispheres 37.0
2250 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 39.2
1794 Male, age 80, right hemisphere 41.8
2521 Female, age 94, right hemisphere 39.9
1847 Female, age 91, left hemisphere 39.2
2848 Male, age 76, right hemisphere 38.8
1841 Female, age 85, right hemisphere 36.5
Subiculum
nTPM: 40.3
2619 Male, age 74, both hemispheres 41.7
2042 Male, age 76, both hemispheres 41.2
2729 Female, age 91, right hemisphere 40.1
1901 Male, age 80, both hemispheres 39.8
1977 Female, age 85, both hemispheres 39.4
2438 Female, age 94, left hemisphere 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.7
Samples: 197

Max nTPM: 66.4
Min nTPM: 20.6
Std nTPM: 6.3
Median nTPM: 32.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 66.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 51.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 49.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 48.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 47.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 46.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 46.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.6
FF:10153-102I9 76 years, female 95.5
FF:10169-103B7 60 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.4
Min nTPM: 21.2
Sample A Female 32.4
Sample B Female 29.9
Sample C Male 28.6
Sample D Male 21.2
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.6
Sample A Female 29.8
Sample B Female 27.6
Sample C Male 31.7
Sample D Male 28.6
Subiculum
nTPM: 27.3
Samples: 4

Max nTPM: 33.0
Min nTPM: 24.4
Sample A Female 33.0
Sample B Female 27.3
Sample C Male 24.4
Sample D Male 24.5
Ventral hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 22.5
Sample A Female 24.6
Sample B Female 22.5
Sample C Male 32.0
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 26.8
Min nTPM: 19.3
Sample A Male 24.2
Sample B Male 26.8
Sample C Female 21.7
Sample D Female 19.3
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 23.0
Sample A Male 24.3
Sample B Male 24.8
Sample C Female 23.0
Sample D Female 24.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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