COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.3 nTPM
HPA:4.0 nTPM
GTEx:16.3 nTPM
FANTOM5:40.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 4.0
overview
Male, age 54 		Colon sample 67
nTPM: 6.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 30.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 1.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 1.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.2
Samples: 373

Max nTPM: 72.0
Min nTPM: 1.8
Std nTPM: 9.8
Median nTPM: 11.7
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 72.0
GTEX-1I6K6-1926-SM-A96SN 30-39 years, male 68.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 63.5
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 60.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 52.9
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 52.8
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 49.7
GTEX-1B932-2126-SM-7IGMU 40-49 years, female 40.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 39.6
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 39.1
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 38.9
Show allShow less
Colon - Transverse
Average nTPM: 16.3
Samples: 406

Max nTPM: 155.7
Min nTPM: 1.8
Std nTPM: 14.3
Median nTPM: 12.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 155.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 124.3
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 79.6
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 72.3
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 66.4
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 61.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 60.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 57.7
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 54.0
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 53.2
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 53.1
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 40.0
FF:10014-101C5 62,83,84 years, mixed 40.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.