HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.7 nTPM
HPA:38.7 nTPM
GTEx:40.9 nTPM
FANTOM5:55.3 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:10.9 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008701
Glial cells Medium
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.7
Sample id Sample description nTPM
Hippocampus
nTPM: 36.7
1898 Male, age 80, left hemisphere 39.3
2148 Female, age 91, left hemisphere 39.2
2529 Female, age 94, left hemisphere 37.6
1855 Male, age 76, left hemisphere 37.5
2621 Female, age 67, right hemisphere 33.7
1911 Female, age 85, right hemisphere 33.1
Dentate gyrus
nTPM: 37.6
2530 Female, age 94, left hemisphere 46.6
2246 Female, age 85, both hemispheres 37.1
1927 Female, age 91, both hemispheres 36.0
2010 Male, age 76, both hemispheres 35.6
2528 Male, age 74, both hemispheres 35.2
2531 Female, age 67, both hemispheres 35.1
Entorhinal gyrus
nTPM: 36.5
2686 Male, age 75, right hemisphere 41.6
1938 Female, age 85, left hemisphere 37.8
1787 Male, age 76, left hemisphere 37.5
2764 Male, age 80, right hemisphere 35.1
2117 Female, age 91, right hemisphere 33.5
2613 Female, age 94, left hemisphere 33.3
Hippocampus, CA1
nTPM: 36.9
2749 Male, age 80, left hemisphere 41.0
1873 Female, age 85, both hemispheres 39.7
2082 Female, age 91, right hemisphere 35.8
2045 Male, age 76, both hemispheres 34.2
2527 Male, age 74, both hemispheres 33.9
Hippocampus, CA2
nTPM: 38.7
2113 Female, age 91, right hemisphere 43.2
1940 Female, age 85, left hemisphere 39.7
1892 Male, age 76, both hemispheres 39.1
2249 Male, age 74, both hemispheres 37.4
1963 Male, age 80, left hemisphere 36.9
2437 Female, age 94, left hemisphere 35.8
Hippocampus, CA3
nTPM: 36.6
1891 Female, age 85, both hemispheres 38.6
2620 Female, age 94, left hemisphere 38.0
2436 Male, age 74, both hemispheres 36.3
1867 Male, age 76, both hemispheres 36.1
2137 Male, age 80, left hemisphere 35.5
2861 Female, age 67, both hemispheres 35.0
Parahippocampal cortex
nTPM: 37.2
1990 Female, age 91, right hemisphere 42.0
2693 Female, age 94, both hemispheres 39.7
2245 Female, age 91, both hemispheres 39.6
2532 Female, age 72, left hemisphere 38.7
1850 Male, age 80, both hemispheres 38.2
1933 Female, age 85, both hemispheres 38.1
2250 Female, age 67, right hemisphere 34.6
2622 Female, age 67, right hemisphere 33.9
2018 Male, age 76, both hemispheres 33.8
2692 Male, age 74, both hemispheres 33.6
Perirhinal gyrus
nTPM: 38.4
1794 Male, age 80, right hemisphere 42.2
1841 Female, age 85, right hemisphere 41.7
1847 Female, age 91, left hemisphere 40.9
2848 Male, age 76, right hemisphere 34.0
2521 Female, age 94, right hemisphere 33.4
Subiculum
nTPM: 38.5
2729 Female, age 91, right hemisphere 41.2
2619 Male, age 74, both hemispheres 40.2
2438 Female, age 94, left hemisphere 39.1
1901 Male, age 80, both hemispheres 38.7
1977 Female, age 85, both hemispheres 37.6
2042 Male, age 76, both hemispheres 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.9
Samples: 197

Max nTPM: 65.4
Min nTPM: 25.4
Std nTPM: 5.9
Median nTPM: 40.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 55.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 53.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 53.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 53.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 52.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 52.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 51.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 51.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 51.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.3
FF:10153-102I9 76 years, female 64.6
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 28.5
Min nTPM: 18.1
Sample A Female 28.5
Sample B Female 21.9
Sample C Male 24.6
Sample D Male 18.1
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.6
Sample A Female 20.2
Sample B Female 18.8
Sample C Male 17.4
Sample D Male 15.6
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.4
Sample A Female 23.0
Sample B Female 17.4
Sample C Male 18.1
Sample D Male 19.0
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.2
Sample A Female 20.9
Sample B Female 17.2
Sample C Male 25.0
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.9
Sample A Male 9.6
Sample B Male 10.9
Sample C Female 8.2
Sample D Female 7.9
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.3
Sample A Male 12.4
Sample B Male 11.0
Sample C Female 9.3
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
69079988 Antisense, RP_050324_01_B03, Mouse strain C57BL/6J (56 days, male) 6.2

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