COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.4 nTPM
HPA:17.4 nTPM
GTEx:45.4 nTPM
FANTOM5:65.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA008701
Endothelial cells High
Glandular cells High
Peripheral nerve/ganglion High



COLON - HPA RNA-seqi
Average nTPM 17.4
overview
Male, age 54 		Colon sample 67
nTPM: 13.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 11.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 29.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 20.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 26.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 20.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 19.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 21
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 25.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 45.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.4
Samples: 373

Max nTPM: 76.6
Min nTPM: 26.3
Std nTPM: 8.8
Median nTPM: 44.3
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 76.6
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 76.5
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 72.8
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 72.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 71.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 67.7
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 66.5
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 65.7
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 65.1
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 64.7
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 63.9
Show allShow less
Colon - Transverse
Average nTPM: 36.5
Samples: 406

Max nTPM: 72.7
Min nTPM: 20.4
Std nTPM: 7.2
Median nTPM: 35.0
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 72.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 63.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 60.3
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 59.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 57.5
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 57.4
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 55.3
GTEX-11GSP-1626-SM-5986N 60-69 years, female 54.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 54.2
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 54.1
GTEX-18A7A-2226-SM-7LT8K 50-59 years, female 52.9
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 65.7
FF:10014-101C5 62,83,84 years, mixed 65.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.