HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:3.6 nTPM
HPA:3.6 nTPM
GTEx:99.7 nTPM
FANTOM5:353.7 Scaled Tags Per Million
Pig:16.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050162Antibody HPA053176Antibody CAB002798Antibody CAB015402
Glial cells Not detectedNot detectedMediumMedium
Neuronal cells Not detectedNot detectedNot detectedMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3.6
Sample id Sample description nTPM
Hippocampus
nTPM: 3.5
1855 Male, age 76, left hemisphere 4.3
1898 Male, age 80, left hemisphere 3.7
2148 Female, age 91, left hemisphere 3.4
2529 Female, age 94, left hemisphere 3.1
2621 Female, age 67, right hemisphere 3.1
1911 Female, age 85, right hemisphere 3.0
Dentate gyrus
nTPM: 3.6
2010 Male, age 76, both hemispheres 5.6
1927 Female, age 91, both hemispheres 3.5
2528 Male, age 74, both hemispheres 3.4
2530 Female, age 94, left hemisphere 3.2
2531 Female, age 67, both hemispheres 3.1
2246 Female, age 85, both hemispheres 3.0
Entorhinal gyrus
nTPM: 3.3
1787 Male, age 76, left hemisphere 4.0
2764 Male, age 80, right hemisphere 3.7
2117 Female, age 91, right hemisphere 3.4
2613 Female, age 94, left hemisphere 3.2
2686 Male, age 75, right hemisphere 3.1
1938 Female, age 85, left hemisphere 2.5
Hippocampus, CA1
nTPM: 3.5
2045 Male, age 76, both hemispheres 4.4
2749 Male, age 80, left hemisphere 3.7
2082 Female, age 91, right hemisphere 3.6
1873 Female, age 85, both hemispheres 3.3
2527 Male, age 74, both hemispheres 2.8
Hippocampus, CA2
nTPM: 3.6
1940 Female, age 85, left hemisphere 4.5
1892 Male, age 76, both hemispheres 3.7
1963 Male, age 80, left hemisphere 3.6
2113 Female, age 91, right hemisphere 3.6
2249 Male, age 74, both hemispheres 3.1
2437 Female, age 94, left hemisphere 3.1
Hippocampus, CA3
nTPM: 3.4
1867 Male, age 76, both hemispheres 4.5
2137 Male, age 80, left hemisphere 3.7
2861 Female, age 67, both hemispheres 3.3
2620 Female, age 94, left hemisphere 3.2
2436 Male, age 74, both hemispheres 3.0
1891 Female, age 85, both hemispheres 2.9
Parahippocampal cortex
nTPM: 3.4
2018 Male, age 76, both hemispheres 5.4
1850 Male, age 80, both hemispheres 3.7
1990 Female, age 91, right hemisphere 3.5
2245 Female, age 91, both hemispheres 3.4
2532 Female, age 72, left hemisphere 3.4
2250 Female, age 67, right hemisphere 3.2
2622 Female, age 67, right hemisphere 3.1
2693 Female, age 94, both hemispheres 3.1
1933 Female, age 85, both hemispheres 2.4
2692 Male, age 74, both hemispheres 2.4
Perirhinal gyrus
nTPM: 3.3
1794 Male, age 80, right hemisphere 3.8
1847 Female, age 91, left hemisphere 3.4
1841 Female, age 85, right hemisphere 3.1
2521 Female, age 94, right hemisphere 3.1
2848 Male, age 76, right hemisphere 3.1
Subiculum
nTPM: 3.6
2042 Male, age 76, both hemispheres 5.3
1901 Male, age 80, both hemispheres 3.6
2729 Female, age 91, right hemisphere 3.6
2438 Female, age 94, left hemisphere 3.1
2619 Male, age 74, both hemispheres 3.0
1977 Female, age 85, both hemispheres 2.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.7
Samples: 197

Max nTPM: 449.6
Min nTPM: 8.0
Std nTPM: 84.8
Median nTPM: 75.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 449.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 406.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 379.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 374.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 352.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 346.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 330.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 317.2
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 297.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 292.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 284.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 353.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 353.7
FF:10169-103B7 60 years, female 396.5
FF:10153-102I9 76 years, female 310.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 26.3
Min nTPM: 8.6
Sample A Female 14.0
Sample B Female 9.7
Sample C Male 26.3
Sample D Male 8.6
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 6.5
Sample A Female 19.2
Sample B Female 13.8
Sample C Male 25.8
Sample D Male 6.5
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 27.3
Min nTPM: 7.2
Sample A Female 12.3
Sample B Female 7.2
Sample C Male 16.1
Sample D Male 27.3
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 28.8
Min nTPM: 9.2
Sample A Female 11.0
Sample B Female 9.2
Sample C Male 28.8
Sample D Male 14.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.