HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.1 nTPM
HPA:60.1 nTPM
GTEx:51.5 nTPM
FANTOM5:24.9 Scaled Tags Per Million
Pig:51.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045727
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.1
Sample id Sample description nTPM
Hippocampus
nTPM: 58.5
1898 Male, age 80, left hemisphere 62.4
1911 Female, age 85, right hemisphere 59.8
2529 Female, age 94, left hemisphere 58.4
1855 Male, age 76, left hemisphere 57.7
2148 Female, age 91, left hemisphere 57.4
2621 Female, age 67, right hemisphere 55.7
Dentate gyrus
nTPM: 58.2
2528 Male, age 74, both hemispheres 61.5
2010 Male, age 76, both hemispheres 61.0
1927 Female, age 91, both hemispheres 59.7
2530 Female, age 94, left hemisphere 56.5
2246 Female, age 85, both hemispheres 55.9
2531 Female, age 67, both hemispheres 54.6
Entorhinal gyrus
nTPM: 56.7
2117 Female, age 91, right hemisphere 60.2
1938 Female, age 85, left hemisphere 60.0
2764 Male, age 80, right hemisphere 56.4
1787 Male, age 76, left hemisphere 55.9
2686 Male, age 75, right hemisphere 55.2
2613 Female, age 94, left hemisphere 52.3
Hippocampus, CA1
nTPM: 59.6
2749 Male, age 80, left hemisphere 62.6
2527 Male, age 74, both hemispheres 59.6
1873 Female, age 85, both hemispheres 59.5
2082 Female, age 91, right hemisphere 59.4
2045 Male, age 76, both hemispheres 57.0
Hippocampus, CA2
nTPM: 60.1
2249 Male, age 74, both hemispheres 65.5
1963 Male, age 80, left hemisphere 61.2
1940 Female, age 85, left hemisphere 60.3
1892 Male, age 76, both hemispheres 60.0
2113 Female, age 91, right hemisphere 58.6
2437 Female, age 94, left hemisphere 55.3
Hippocampus, CA3
nTPM: 58.6
2436 Male, age 74, both hemispheres 62.6
2137 Male, age 80, left hemisphere 60.4
1867 Male, age 76, both hemispheres 59.9
1891 Female, age 85, both hemispheres 59.8
2620 Female, age 94, left hemisphere 54.8
2861 Female, age 67, both hemispheres 54.0
Parahippocampal cortex
nTPM: 57.3
1850 Male, age 80, both hemispheres 60.0
2018 Male, age 76, both hemispheres 59.1
1990 Female, age 91, right hemisphere 58.8
2250 Female, age 67, right hemisphere 58.8
1933 Female, age 85, both hemispheres 58.4
2692 Male, age 74, both hemispheres 56.4
2245 Female, age 91, both hemispheres 56.3
2532 Female, age 72, left hemisphere 56.1
2693 Female, age 94, both hemispheres 55.9
2622 Female, age 67, right hemisphere 53.3
Perirhinal gyrus
nTPM: 57.5
1847 Female, age 91, left hemisphere 60.4
1841 Female, age 85, right hemisphere 59.2
1794 Male, age 80, right hemisphere 58.2
2521 Female, age 94, right hemisphere 55.0
2848 Male, age 76, right hemisphere 55.0
Subiculum
nTPM: 58.6
2729 Female, age 91, right hemisphere 60.7
1901 Male, age 80, both hemispheres 60.1
1977 Female, age 85, both hemispheres 59.6
2042 Male, age 76, both hemispheres 58.1
2619 Male, age 74, both hemispheres 57.3
2438 Female, age 94, left hemisphere 55.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.5
Samples: 197

Max nTPM: 123.6
Min nTPM: 30.2
Std nTPM: 11.8
Median nTPM: 49.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 123.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 85.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 79.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 78.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 74.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 74.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 73.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 72.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 71.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.9
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 66.3
Min nTPM: 41.5
Sample A Female 66.3
Sample B Female 50.5
Sample C Male 45.6
Sample D Male 41.5
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 56.7
Min nTPM: 34.3
Sample A Female 42.9
Sample B Female 56.7
Sample C Male 45.5
Sample D Male 34.3
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 56.5
Min nTPM: 36.3
Sample A Female 56.5
Sample B Female 43.5
Sample C Male 36.3
Sample D Male 43.0
Ventral hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 49.4
Min nTPM: 37.2
Sample A Female 48.5
Sample B Female 37.2
Sample C Male 49.4
Sample D Male 49.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.