BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:0.1 nTPM
HPA:0.1 nTPM
GTEx:1.2 nTPM
FANTOM5:11.7 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.1
1854 Male, age 80, left hemisphere 0.2
1781 Male, age 74, unknown 0.1
1857 Female, age 85, left hemisphere 0.1
2288 Male, age 75, left hemisphere 0.1
2289 Male, age 61, right hemisphere 0.1
2290 Female, age 72, unknown 0.1
2481 Female, age 94, left hemisphere 0.1
2846 Female, age 79, unknown 0.1
Claustrum
nTPM: 0.1
1956 Male, age 74, unknown 0.1
2196 Female, age 79, unknown 0.1
2198 Male, age 80, both hemispheres 0.1
2284 Female, age 91, both hemispheres 0.1
2292 Female, age 85, both hemispheres 0.1
2392 Female, age 94, both hemispheres 0.1
2491 Male, age 75, both hemispheres 0.1
2568 Male, age 61, both hemispheres 0.1
2645 Female, age 72, unknown 0.1
Globus pallidus, externus
nTPM: 0.1
1996 Male, age 80, right hemisphere 0.3
2395 Male, age 75, both hemispheres 0.1
2567 Female, age 72, unknown 0.1
2646 Male, age 61, right hemisphere 0.1
2772 Female, age 79, unknown 0.1
Globus pallidus, internus
nTPM: 0.1
1818 Male, age 74, unknown 0.1
2037 Male, age 80, right hemisphere 0.1
2111 Female, age 85, right hemisphere 0.1
2287 Male, age 75, right hemisphere 0.1
2483 Female, age 94, right hemisphere 0.1
2566 Female, age 72, unknown 0.1
2778 Female, age 91, both hemispheres 0.1
Nucleus accumbens
nTPM: 0.1
1783 Male, age 74, unknown 0.2
1806 Female, age 85, left hemisphere 0.1
1856 Female, age 91, right hemisphere 0.1
2286 Male, age 75, left hemisphere 0.1
2391 Female, age 94, left hemisphere 0.1
2698 Female, age 72, unknown 0.1
2732 Male, age 80, right hemisphere 0.1
2824 Male, age 61, right hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.1
2393 Male, age 80, right hemisphere 0.1
2484 Female, age 94, left hemisphere 0.1
2569 Male, age 61, both hemispheres 0.1
2821 Male, age 75, both hemispheres 0.1
Nucleus of the diagonal band
nTPM: 0.1
1812 Female, age 91, both hemispheres 0.1
1979 Male, age 74, unknown 0.1
2029 Male, age 61, right hemisphere 0.1
2195 Female, age 85, both hemispheres 0.1
2775 Male, age 80, right hemisphere 0.1
Olfactory tubercle
nTPM: 0.1
1846 Male, age 80, right hemisphere 0.1
1998 Female, age 91, both hemispheres 0.1
2487 Female, age 94, left hemisphere 0.1
2856 Male, age 75, right hemisphere 0.1
Putamen
nTPM: 0.1
2489 Female, age 72, unknown 0.2
1829 Male, age 74, unknown 0.1
1838 Male, age 80, right hemisphere 0.1
1937 Female, age 91, right hemisphere 0.1
2466 Female, age 79, unknown 0.1
2482 Female, age 94, left hemisphere 0.1
2647 Male, age 75, left hemisphere 0.1
Septal nuclei
nTPM: 0.1
1960 Male, age 74, unknown 0.2
2199 Male, age 80, right hemisphere 0.2
2009 Female, age 91, both hemispheres 0.1
2031 Female, age 72, unknown 0.1
2059 Female, age 85, both hemispheres 0.1
2394 Male, age 61, left hemisphere 0.1
2629 Female, age 94, right hemisphere 0.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 1.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1.2
Samples: 246

Max nTPM: 6.8
Min nTPM: 0.0
Std nTPM: 0.9
Median nTPM: 1.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 4.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 3.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 3.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 1.2
Samples: 246

Max nTPM: 4.9
Min nTPM: 0.0
Std nTPM: 0.9
Median nTPM: 1.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 4.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 4.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 4.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 3.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.0
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Brain - Putamen (basal ganglia)
Average nTPM: 1.2
Samples: 205

Max nTPM: 4.3
Min nTPM: 0.0
Std nTPM: 0.9
Median nTPM: 1.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 4.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 3.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 3.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 3.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 3.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 10.1
FF:10164-103B2 76 years, female 10.1
Globus pallidus
Scaled Tags Per Million: 11.7
FF:10175-103C4 60 years, female 11.8
FF:10161-103A8 76 years, female 11.5
Nucleus accumbens
Scaled Tags Per Million: 10.5
FF:10037-101F1 23-56 years, mixed 10.5
Putamen
Scaled Tags Per Million: 9.2
FF:10176-103C5 60 years, female 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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