HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:4.6 nTPM
HPA:4.6 nTPM
GTEx:14.1 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Mouse:10.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.6
Sample id Sample description nTPM
Hippocampus
nTPM: 4.6
1855 Male, age 76, left hemisphere 5.8
1898 Male, age 80, left hemisphere 4.7
2621 Female, age 67, right hemisphere 4.7
2148 Female, age 91, left hemisphere 4.6
1911 Female, age 85, right hemisphere 4.4
2529 Female, age 94, left hemisphere 3.5
Dentate gyrus
nTPM: 4.0
2246 Female, age 85, both hemispheres 4.4
2530 Female, age 94, left hemisphere 4.4
2010 Male, age 76, both hemispheres 4.0
1927 Female, age 91, both hemispheres 3.8
2528 Male, age 74, both hemispheres 3.7
2531 Female, age 67, both hemispheres 3.6
Entorhinal gyrus
nTPM: 3.8
2117 Female, age 91, right hemisphere 4.3
1787 Male, age 76, left hemisphere 4.1
2613 Female, age 94, left hemisphere 3.7
1938 Female, age 85, left hemisphere 3.6
2764 Male, age 80, right hemisphere 3.6
2686 Male, age 75, right hemisphere 3.5
Hippocampus, CA1
nTPM: 4.1
2045 Male, age 76, both hemispheres 4.9
2082 Female, age 91, right hemisphere 4.3
2527 Male, age 74, both hemispheres 4.1
1873 Female, age 85, both hemispheres 3.9
2749 Male, age 80, left hemisphere 3.3
Hippocampus, CA2
nTPM: 4.1
1940 Female, age 85, left hemisphere 5.7
1892 Male, age 76, both hemispheres 4.2
1963 Male, age 80, left hemisphere 4.0
2249 Male, age 74, both hemispheres 3.7
2437 Female, age 94, left hemisphere 3.7
2113 Female, age 91, right hemisphere 3.5
Hippocampus, CA3
nTPM: 4.1
1867 Male, age 76, both hemispheres 4.5
1891 Female, age 85, both hemispheres 4.1
2436 Male, age 74, both hemispheres 4.1
2137 Male, age 80, left hemisphere 4.0
2620 Female, age 94, left hemisphere 3.8
2861 Female, age 67, both hemispheres 3.6
Parahippocampal cortex
nTPM: 3.9
2250 Female, age 67, right hemisphere 4.9
2018 Male, age 76, both hemispheres 4.1
2692 Male, age 74, both hemispheres 4.1
2245 Female, age 91, both hemispheres 4.0
1850 Male, age 80, both hemispheres 3.8
1990 Female, age 91, right hemisphere 3.7
2532 Female, age 72, left hemisphere 3.7
2622 Female, age 67, right hemisphere 3.6
2693 Female, age 94, both hemispheres 3.6
1933 Female, age 85, both hemispheres 3.4
Perirhinal gyrus
nTPM: 3.8
2521 Female, age 94, right hemisphere 4.2
1847 Female, age 91, left hemisphere 4.0
1841 Female, age 85, right hemisphere 3.7
2848 Male, age 76, right hemisphere 3.7
1794 Male, age 80, right hemisphere 3.4
Subiculum
nTPM: 4.2
2042 Male, age 76, both hemispheres 4.8
2729 Female, age 91, right hemisphere 4.7
2619 Male, age 74, both hemispheres 4.4
1977 Female, age 85, both hemispheres 3.9
1901 Male, age 80, both hemispheres 3.8
2438 Female, age 94, left hemisphere 3.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 95.4
Min nTPM: 1.7
Std nTPM: 10.9
Median nTPM: 11.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 95.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 59.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 47.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 45.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 41.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 38.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 37.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 36.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 32.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.0
FF:10153-102I9 76 years, female 17.6
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.3
Sample A Male 10.8
Sample B Male 11.8
Sample C Female 11.1
Sample D Female 9.3
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.6
Sample A Male 8.6
Sample B Male 9.3
Sample C Female 8.9
Sample D Female 8.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73512528 Antisense, RP_050818_01_B08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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