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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in glomeruli: High
Cells in tubules: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:375.2 nTPM
HPA:92.9 nTPM
GTEx:375.2 nTPM
FANTOM5:508.2 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031454Antibody CAB024589
Cells in glomeruli HighMedium
Cells in tubules LowNot detected





KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 92.9
overview
Female, age 58
Kidney sample 55
nTPM: 120.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 255
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 0.4
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 150.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 66.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 85.9
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 0.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 86
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 71.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 375.2
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 375.2
Samples: 85

Max nTPM: 822.9
Min nTPM: 188.3
Std nTPM: 122.2
Median nTPM: 352.5
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 822.9
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 816.7
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 725.9
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 658.9
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 637.0
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 567.4
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 539.5
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 529.9
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 516.4
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 496.9
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 473.6
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 472.7
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 472.5
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 454.8
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 447.5
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 446.2
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 445.8
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 443.4
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 440.7
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 434.4
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 432.3
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 430.8
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 423.8
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 417.9
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 416.2
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 415.0
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 411.0
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 400.3
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 400.2
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 397.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 390.3
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 388.2
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 378.7
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 371.8
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 370.8
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 369.9
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 363.7
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 361.4
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 361.2
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 359.3
GTEX-14C39-2126-SM-664OH 40-49 years, male 357.1
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 355.7
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 352.5
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 349.7
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 348.1
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 348.0
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 347.9
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 347.0
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 336.4
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 336.2
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 335.9
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 333.5
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 333.1
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 332.9
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 326.6
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 315.1
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 311.2
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 310.2
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 308.8
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 308.4
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 300.2
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 298.5
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 297.8
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 296.1
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 293.8
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 291.0
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 289.8
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 285.4
GTEX-RN64-1626-SM-48FD7 50-59 years, male 283.9
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 282.0
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 273.4
GTEX-O5YV-1226-SM-EV795 60-69 years, female 268.3
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 265.8
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 264.8
GTEX-13112-2126-SM-5GCO4 50-59 years, male 253.5
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 253.1
GTEX-12696-0926-SM-5FQTV 60-69 years, male 248.4
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 246.3
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 246.0
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 226.6
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 216.8
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 211.3
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 207.9
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 202.9
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 188.3
Show allShow less
Kidney - Medulla
Average nTPM: 294.3
Samples: 4

Max nTPM: 413.6
Min nTPM: 215.1
Std nTPM: 73.0
Median nTPM: 274.2
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 413.6
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 274.6
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 273.8
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 215.1

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 508.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 508.2
FF:10017-101C8 60,62,63 years, female 508.2

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