HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:99.9 nTPM
HPA:99.9 nTPM
GTEx:104.2 nTPM
FANTOM5:295.8 Scaled Tags Per Million
Pig:93.7 nTPM
Mouse:135.3 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034635Antibody CAB009108
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.9
Sample id Sample description nTPM
Hippocampus
nTPM: 78.5
1898 Male, age 80, left hemisphere 94.8
2148 Female, age 91, left hemisphere 87.9
2621 Female, age 67, right hemisphere 86.4
1855 Male, age 76, left hemisphere 71.2
2529 Female, age 94, left hemisphere 68.6
1911 Female, age 85, right hemisphere 62.3
Dentate gyrus
nTPM: 86.5
2530 Female, age 94, left hemisphere 109.0
1927 Female, age 91, both hemispheres 95.0
2531 Female, age 67, both hemispheres 89.1
2010 Male, age 76, both hemispheres 77.5
2246 Female, age 85, both hemispheres 76.3
2528 Male, age 74, both hemispheres 72.0
Entorhinal gyrus
nTPM: 97.0
2613 Female, age 94, left hemisphere 116.6
2764 Male, age 80, right hemisphere 110.9
2686 Male, age 75, right hemisphere 95.9
1938 Female, age 85, left hemisphere 93.3
1787 Male, age 76, left hemisphere 85.4
2117 Female, age 91, right hemisphere 79.8
Hippocampus, CA1
nTPM: 89.9
2749 Male, age 80, left hemisphere 142.4
1873 Female, age 85, both hemispheres 81.6
2045 Male, age 76, both hemispheres 80.7
2527 Male, age 74, both hemispheres 78.5
2082 Female, age 91, right hemisphere 66.5
Hippocampus, CA2
nTPM: 80.5
1963 Male, age 80, left hemisphere 100.8
1892 Male, age 76, both hemispheres 100.0
2437 Female, age 94, left hemisphere 84.1
1940 Female, age 85, left hemisphere 68.1
2113 Female, age 91, right hemisphere 66.5
2249 Male, age 74, both hemispheres 63.1
Hippocampus, CA3
nTPM: 83.6
2137 Male, age 80, left hemisphere 107.6
2620 Female, age 94, left hemisphere 100.0
2861 Female, age 67, both hemispheres 85.7
1867 Male, age 76, both hemispheres 83.6
1891 Female, age 85, both hemispheres 67.2
2436 Male, age 74, both hemispheres 57.4
Parahippocampal cortex
nTPM: 82.3
1850 Male, age 80, both hemispheres 99.7
2532 Female, age 72, left hemisphere 94.7
2245 Female, age 91, both hemispheres 93.6
1990 Female, age 91, right hemisphere 89.9
1933 Female, age 85, both hemispheres 83.7
2692 Male, age 74, both hemispheres 78.3
2693 Female, age 94, both hemispheres 74.9
2622 Female, age 67, right hemisphere 74.8
2250 Female, age 67, right hemisphere 66.7
2018 Male, age 76, both hemispheres 66.4
Perirhinal gyrus
nTPM: 99.9
1847 Female, age 91, left hemisphere 113.8
1794 Male, age 80, right hemisphere 109.4
2521 Female, age 94, right hemisphere 101.7
2848 Male, age 76, right hemisphere 89.0
1841 Female, age 85, right hemisphere 85.5
Subiculum
nTPM: 78.2
1901 Male, age 80, both hemispheres 90.2
1977 Female, age 85, both hemispheres 89.8
2438 Female, age 94, left hemisphere 89.0
2619 Male, age 74, both hemispheres 68.9
2042 Male, age 76, both hemispheres 67.8
2729 Female, age 91, right hemisphere 63.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.2
Samples: 197

Max nTPM: 192.1
Min nTPM: 41.4
Std nTPM: 29.3
Median nTPM: 99.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 192.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 184.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 175.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 171.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 171.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 170.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 168.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 167.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 164.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 163.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 162.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 295.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 295.8
FF:10169-103B7 60 years, female 348.4
FF:10153-102I9 76 years, female 243.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 87.5
Samples: 4

Max nTPM: 103.1
Min nTPM: 71.8
Sample A Female 103.1
Sample B Female 93.5
Sample C Male 81.7
Sample D Male 71.8
Entorhinal cortex
nTPM: 93.7
Samples: 4

Max nTPM: 98.9
Min nTPM: 89.1
Sample A Female 98.9
Sample B Female 89.3
Sample C Male 97.6
Sample D Male 89.1
Subiculum
nTPM: 90.0
Samples: 4

Max nTPM: 112.5
Min nTPM: 76.7
Sample A Female 112.5
Sample B Female 78.4
Sample C Male 92.5
Sample D Male 76.7
Ventral hippocampus
nTPM: 89.8
Samples: 4

Max nTPM: 119.5
Min nTPM: 62.5
Sample A Female 89.8
Sample B Female 62.5
Sample C Male 119.5
Sample D Male 87.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 135.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.7
Samples: 4

Max nTPM: 147.6
Min nTPM: 123.9
Sample A Male 134.5
Sample B Male 132.6
Sample C Female 123.9
Sample D Female 147.6
Hippocampal formation
nTPM: 135.3
Samples: 4

Max nTPM: 147.3
Min nTPM: 111.9
Sample A Male 111.9
Sample B Male 147.3
Sample C Female 138.3
Sample D Female 143.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
70946413 Antisense, RP_050428_01_B04, Mouse strain C57BL/6J (56 days, male) 16.7
70795466 Antisense, RP_050712_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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