HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.8 nTPM
HPA:82.8 nTPM
GTEx:41.7 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:53.4 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065743
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.8
Sample id Sample description nTPM
Hippocampus
nTPM: 47.8
1911 Female, age 85, right hemisphere 75.0
2529 Female, age 94, left hemisphere 69.1
2621 Female, age 67, right hemisphere 50.9
1898 Male, age 80, left hemisphere 36.0
1855 Male, age 76, left hemisphere 33.4
2148 Female, age 91, left hemisphere 22.6
Dentate gyrus
nTPM: 50.5
2530 Female, age 94, left hemisphere 127.3
2528 Male, age 74, both hemispheres 56.6
2010 Male, age 76, both hemispheres 51.8
2246 Female, age 85, both hemispheres 35.8
2531 Female, age 67, both hemispheres 23.9
1927 Female, age 91, both hemispheres 7.5
Entorhinal gyrus
nTPM: 67.4
2117 Female, age 91, right hemisphere 153.2
2764 Male, age 80, right hemisphere 115.7
1938 Female, age 85, left hemisphere 46.0
2686 Male, age 75, right hemisphere 34.2
2613 Female, age 94, left hemisphere 33.9
1787 Male, age 76, left hemisphere 21.4
Hippocampus, CA1
nTPM: 26.7
1873 Female, age 85, both hemispheres 46.3
2527 Male, age 74, both hemispheres 43.4
2749 Male, age 80, left hemisphere 26.1
2082 Female, age 91, right hemisphere 17.9
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 49.7
1963 Male, age 80, left hemisphere 100.3
2249 Male, age 74, both hemispheres 83.6
2437 Female, age 94, left hemisphere 42.2
1940 Female, age 85, left hemisphere 37.1
2113 Female, age 91, right hemisphere 34.8
1892 Male, age 76, both hemispheres 0.0
Hippocampus, CA3
nTPM: 17.8
1891 Female, age 85, both hemispheres 78.3
1867 Male, age 76, both hemispheres 20.2
2436 Male, age 74, both hemispheres 8.4
2137 Male, age 80, left hemisphere 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 30.1
2692 Male, age 74, both hemispheres 72.8
2532 Female, age 72, left hemisphere 69.6
1990 Female, age 91, right hemisphere 60.3
2245 Female, age 91, both hemispheres 32.1
1850 Male, age 80, both hemispheres 24.1
2018 Male, age 76, both hemispheres 22.5
1933 Female, age 85, both hemispheres 19.9
2250 Female, age 67, right hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 4.1
1794 Male, age 80, right hemisphere 10.2
2521 Female, age 94, right hemisphere 5.4
2848 Male, age 76, right hemisphere 4.7
1841 Female, age 85, right hemisphere 0.0
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 82.8
2042 Male, age 76, both hemispheres 135.2
1901 Male, age 80, both hemispheres 108.1
1977 Female, age 85, both hemispheres 96.5
2619 Male, age 74, both hemispheres 69.3
2438 Female, age 94, left hemisphere 46.7
2729 Female, age 91, right hemisphere 41.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.7
Samples: 197

Max nTPM: 192.6
Min nTPM: 0.7
Std nTPM: 34.0
Median nTPM: 32.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 192.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 165.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 156.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 142.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 141.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 132.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 125.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 123.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 116.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 107.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 107.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10153-102I9 76 years, female 50.1
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 56.7
Min nTPM: 8.4
Sample A Female 56.7
Sample B Female 25.2
Sample C Male 48.3
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 6.1
Sample A Female 7.0
Sample B Female 13.7
Sample C Male 6.1
Sample D Male 10.2
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 7.8
Sample A Female 12.1
Sample B Female 14.0
Sample C Male 7.8
Sample D Male 10.8
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 31.1
Min nTPM: 9.6
Sample A Female 26.4
Sample B Female 9.6
Sample C Male 19.5
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 11.7
Sample A Male 39.6
Sample B Male 27.2
Sample C Female 24.2
Sample D Female 11.7
Hippocampal formation
nTPM: 53.4
Samples: 4

Max nTPM: 78.8
Min nTPM: 39.3
Sample A Male 39.3
Sample B Male 47.4
Sample C Female 78.8
Sample D Female 48.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69447978 Antisense, RP_050419_02_D12, Mouse strain C57BL/6J (56 days, male) 5.1

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