HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.7 nTPM
HPA:68.7 nTPM
GTEx:66.5 nTPM
FANTOM5:312.5 Scaled Tags Per Million
Pig:57.5 nTPM
Mouse:42.5 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046065
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.7
Sample id Sample description nTPM
Hippocampus
nTPM: 68.7
2529 Female, age 94, left hemisphere 83.2
2621 Female, age 67, right hemisphere 81.5
1855 Male, age 76, left hemisphere 66.9
2148 Female, age 91, left hemisphere 64.5
1911 Female, age 85, right hemisphere 63.9
1898 Male, age 80, left hemisphere 52.1
Dentate gyrus
nTPM: 56.0
2246 Female, age 85, both hemispheres 76.4
2528 Male, age 74, both hemispheres 70.2
2531 Female, age 67, both hemispheres 49.2
2010 Male, age 76, both hemispheres 48.8
2530 Female, age 94, left hemisphere 48.5
1927 Female, age 91, both hemispheres 42.9
Entorhinal gyrus
nTPM: 64.5
2686 Male, age 75, right hemisphere 96.1
2117 Female, age 91, right hemisphere 74.7
1938 Female, age 85, left hemisphere 64.4
2613 Female, age 94, left hemisphere 58.0
1787 Male, age 76, left hemisphere 52.7
2764 Male, age 80, right hemisphere 41.2
Hippocampus, CA1
nTPM: 54.3
2527 Male, age 74, both hemispheres 95.2
1873 Female, age 85, both hemispheres 52.2
2082 Female, age 91, right hemisphere 48.9
2045 Male, age 76, both hemispheres 48.3
2749 Male, age 80, left hemisphere 27.1
Hippocampus, CA2
nTPM: 55.0
1940 Female, age 85, left hemisphere 83.0
2437 Female, age 94, left hemisphere 67.9
2113 Female, age 91, right hemisphere 57.3
2249 Male, age 74, both hemispheres 49.7
1963 Male, age 80, left hemisphere 40.9
1892 Male, age 76, both hemispheres 31.1
Hippocampus, CA3
nTPM: 50.9
2861 Female, age 67, both hemispheres 89.4
1891 Female, age 85, both hemispheres 59.2
2436 Male, age 74, both hemispheres 53.4
1867 Male, age 76, both hemispheres 39.9
2137 Male, age 80, left hemisphere 32.9
2620 Female, age 94, left hemisphere 30.8
Parahippocampal cortex
nTPM: 61.7
2692 Male, age 74, both hemispheres 99.0
2250 Female, age 67, right hemisphere 85.3
2622 Female, age 67, right hemisphere 83.9
1933 Female, age 85, both hemispheres 59.9
2018 Male, age 76, both hemispheres 59.6
2693 Female, age 94, both hemispheres 53.2
2245 Female, age 91, both hemispheres 51.8
2532 Female, age 72, left hemisphere 47.1
1990 Female, age 91, right hemisphere 41.6
1850 Male, age 80, both hemispheres 36.1
Perirhinal gyrus
nTPM: 43.1
1841 Female, age 85, right hemisphere 47.0
2521 Female, age 94, right hemisphere 46.0
1847 Female, age 91, left hemisphere 42.8
1794 Male, age 80, right hemisphere 41.2
2848 Male, age 76, right hemisphere 38.8
Subiculum
nTPM: 66.8
2619 Male, age 74, both hemispheres 93.6
2438 Female, age 94, left hemisphere 79.8
2729 Female, age 91, right hemisphere 72.5
2042 Male, age 76, both hemispheres 64.4
1977 Female, age 85, both hemispheres 48.0
1901 Male, age 80, both hemispheres 42.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.5
Samples: 197

Max nTPM: 192.3
Min nTPM: 13.5
Std nTPM: 31.8
Median nTPM: 60.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 192.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 179.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 159.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 158.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 148.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 144.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 142.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 133.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 131.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 128.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 128.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 312.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 312.5
FF:10153-102I9 76 years, female 313.2
FF:10169-103B7 60 years, female 311.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.9
Sample A Female 32.8
Sample B Female 30.9
Sample C Male 38.4
Sample D Male 34.3
Entorhinal cortex
nTPM: 38.1
Samples: 4

Max nTPM: 48.3
Min nTPM: 32.6
Sample A Female 39.0
Sample B Female 32.6
Sample C Male 48.3
Sample D Male 32.6
Subiculum
nTPM: 57.6
Samples: 4

Max nTPM: 66.1
Min nTPM: 48.8
Sample A Female 66.1
Sample B Female 55.9
Sample C Male 59.5
Sample D Male 48.8
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 65.6
Min nTPM: 31.2
Sample A Female 34.6
Sample B Female 35.3
Sample C Male 65.6
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 47.5
Min nTPM: 34.4
Sample A Male 43.4
Sample B Male 34.4
Sample C Female 44.1
Sample D Female 47.5
Hippocampal formation
nTPM: 42.5
Samples: 4

Max nTPM: 43.3
Min nTPM: 41.7
Sample A Male 42.4
Sample B Male 42.7
Sample C Female 43.3
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
100142525 Antisense, RP_110421_03_B04, Mouse strain C57BL/6J (56 days, male) 1.2
71015815 Antisense, RP_050725_02_H11, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

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