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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:246.4 nTPM
HPA:246.4 nTPM
FANTOM5:132.4 Scaled Tags Per Million

THALAMUS - Annotated protein expression
Pending normal tissue analysis

THALAMUS - HPA Brain RNA-seq
Max nTPM 246.4
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 204.2
2497 Male, age 66, unknown 213.6
2032 Female, age 42, unknown 211.8
2396 Male, age 61, right hemisphere 187.3
Centromedial thalamic nucleus
nTPM: 201.3
2401 Male, age 76, right hemisphere 211.1
2279 Female, age 85, left hemisphere 191.4
Habenula
nTPM: 221.0
1957 Male, age 80, both hemispheres 231.9
2203 Male, age 61, left hemisphere 224.9
2276 Male, age 66, unknown 221.3
2252 Male, age 62, unknown 205.9
Lateral geniculate body
nTPM: 225.6
2857 Male, age 74, right hemisphere 254.1
2035 Female, age 72, unknown 228.9
2399 Male, age 61, left hemisphere 227.2
2575 Female, age 94, right hemisphere 225.1
2106 Female, age 67, right hemisphere 221.0
2659 Male, age 66, unknown 220.7
2841 Male, age 80, both hemispheres 220.0
1953 Male, age 62, unknown 207.6
Lateral thalamic nuclei
nTPM: 220.0
2573 Female, age 94, left hemisphere 236.4
2661 Female, age 72, unknown 225.1
1903 Male, age 76, left hemisphere 217.8
2765 Female, age 67, both hemispheres 212.5
2577 Male, age 74, both hemispheres 208.0
Medial dorsal thalamic nucleus
nTPM: 228.2
2572 Female, age 94, right hemisphere 276.2
1810 Male, age 48, unknown 246.4
2576 Male, age 74, both hemispheres 239.0
2283 Male, age 80, right hemisphere 232.1
2492 Male, age 75, right hemisphere 231.4
2026 Male, age 62, unknown 229.2
2498 Male, age 66, unknown 226.3
2402 Female, age 67, both hemispheres 225.4
2039 Female, age 72, unknown 218.7
1930 Female, age 42, unknown 212.6
1859 Male, age 76, both hemispheres 212.5
2660 Female, age 72, unknown 208.6
1971 Male, age 61, right hemisphere 208.2
Medial geniculate body
nTPM: 231.3
2650 Female, age 94, left hemisphere 243.8
2049 Male, age 76, both hemispheres 237.8
2657 Male, age 74, right hemisphere 237.3
2571 Male, age 75, right hemisphere 232.3
2207 Male, age 80, right hemisphere 230.5
2217 Female, age 72, unknown 225.1
1811 Female, age 42, unknown 212.1
Nucleus reuniens
nTPM: 209.3
2205 Male, age 80, left hemisphere 226.9
2212 Female, age 67, left hemisphere 201.0
2210 Female, age 85, left hemisphere 200.0
Nucleus rhomboideus
nTPM: 209.2
2206 Male, age 80, both hemispheres 228.5
2280 Female, age 85, left hemisphere 199.7
2213 Female, age 67, left hemisphere 199.3
Posterior thalamic nucleus
nTPM: 246.4
2649 Female, age 94, both hemispheres 295.8
2655 Male, age 74, right hemisphere 249.7
2495 Female, age 67, right hemisphere 220.5
2266 Male, age 76, right hemisphere 219.5
Pulvinar
nTPM: 226.3
2724 Male, age 74, right hemisphere 251.2
1932 Male, age 80, right hemisphere 249.9
2499 Male, age 66, unknown 235.6
2582 Female, age 72, unknown 230.5
2496 Female, age 67, right hemisphere 227.5
1899 Female, age 42, unknown 215.6
2398 Male, age 61, left hemisphere 214.7
1929 Male, age 48, unknown 214.3
1972 Male, age 62, unknown 212.9
2214 Male, age 76, right hemisphere 210.3
Subthalamic nucleus
nTPM: 210.5
2282 Male, age 61, both hemispheres 223.6
2056 Female, age 72, unknown 214.1
2216 Male, age 48, unknown 213.1
2275 Male, age 66, unknown 211.8
2124 Male, age 62, unknown 207.7
2779 Female, age 42, unknown 207.4
2658 Male, age 74, both hemispheres 205.4
2406 Female, age 72, unknown 200.5
Ventral posterolateral thalamic nucleus
nTPM: 219.3
2197 Male, age 80, both hemispheres 246.7
2570 Male, age 75, right hemisphere 228.2
2740 Male, age 76, right hemisphere 214.9
2397 Male, age 61, right hemisphere 213.5
2581 Female, age 72, unknown 207.9
2578 Male, age 74, both hemispheres 204.6
Ventral posteromedial thalamic nucleus
nTPM: 218.8
2758 Male, age 80, both hemispheres 240.2
2281 Male, age 75, right hemisphere 226.4
2127 Male, age 76, right hemisphere 215.3
2653 Male, age 74, both hemispheres 208.9
2202 Male, age 61, left hemisphere 203.1
Ventral thalamic nuclei
nTPM: 215.9
2580 Male, age 66, unknown 227.4
2204 Male, age 80, both hemispheres 225.0
1860 Male, age 76, both hemispheres 222.9
2285 Male, age 62, unknown 216.9
2291 Female, age 72, unknown 213.9
2858 Female, age 72, unknown 210.8
1912 Female, age 42, unknown 210.3
2652 Male, age 74, left hemisphere 208.2
1845 Male, age 48, unknown 207.9
Ventromedial nucleus
nTPM: 204.1
1982 Female, age 72, unknown 206.6
1822 Female, age 42, unknown 201.6
Zona incerta
nTPM: 211.3
2208 Male, age 80, right hemisphere 231.1
2403 Male, age 62, unknown 224.6
2215 Male, age 66, unknown 202.6
2663 Female, age 72, unknown 202.4
2822 Male, age 74, right hemisphere 195.8

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 132.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 132.4
FF:10154-103A1 76 years, female 132.4

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