HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:62.1 nTPM
HPA:62.1 nTPM
GTEx:74.2 nTPM
FANTOM5:66.8 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:228.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.1
Sample id Sample description nTPM
Hippocampus
nTPM: 61.4
1898 Male, age 80, left hemisphere 63.1
2529 Female, age 94, left hemisphere 62.2
1855 Male, age 76, left hemisphere 61.3
1911 Female, age 85, right hemisphere 61.3
2621 Female, age 67, right hemisphere 61.1
2148 Female, age 91, left hemisphere 59.3
Dentate gyrus
nTPM: 61.0
2010 Male, age 76, both hemispheres 63.1
2528 Male, age 74, both hemispheres 62.3
2530 Female, age 94, left hemisphere 61.4
2246 Female, age 85, both hemispheres 60.4
1927 Female, age 91, both hemispheres 59.8
2531 Female, age 67, both hemispheres 58.9
Entorhinal gyrus
nTPM: 61.3
2117 Female, age 91, right hemisphere 62.3
2764 Male, age 80, right hemisphere 61.8
2686 Male, age 75, right hemisphere 61.6
1787 Male, age 76, left hemisphere 61.5
1938 Female, age 85, left hemisphere 61.1
2613 Female, age 94, left hemisphere 59.6
Hippocampus, CA1
nTPM: 61.7
1873 Female, age 85, both hemispheres 63.5
2749 Male, age 80, left hemisphere 62.8
2082 Female, age 91, right hemisphere 61.1
2527 Male, age 74, both hemispheres 60.7
2045 Male, age 76, both hemispheres 60.2
Hippocampus, CA2
nTPM: 62.1
2249 Male, age 74, both hemispheres 64.2
1963 Male, age 80, left hemisphere 64.1
2113 Female, age 91, right hemisphere 61.8
2437 Female, age 94, left hemisphere 61.5
1892 Male, age 76, both hemispheres 60.6
1940 Female, age 85, left hemisphere 60.4
Hippocampus, CA3
nTPM: 60.6
1891 Female, age 85, both hemispheres 62.1
2436 Male, age 74, both hemispheres 61.7
1867 Male, age 76, both hemispheres 61.3
2137 Male, age 80, left hemisphere 60.2
2861 Female, age 67, both hemispheres 59.1
2620 Female, age 94, left hemisphere 59.0
Parahippocampal cortex
nTPM: 60.6
2018 Male, age 76, both hemispheres 62.4
1933 Female, age 85, both hemispheres 61.8
1990 Female, age 91, right hemisphere 61.4
2692 Male, age 74, both hemispheres 61.0
2245 Female, age 91, both hemispheres 60.8
1850 Male, age 80, both hemispheres 60.7
2250 Female, age 67, right hemisphere 60.7
2693 Female, age 94, both hemispheres 59.2
2532 Female, age 72, left hemisphere 59.0
2622 Female, age 67, right hemisphere 58.9
Perirhinal gyrus
nTPM: 61.0
1847 Female, age 91, left hemisphere 62.1
1794 Male, age 80, right hemisphere 61.8
1841 Female, age 85, right hemisphere 61.7
2848 Male, age 76, right hemisphere 59.7
2521 Female, age 94, right hemisphere 59.6
Subiculum
nTPM: 62.0
2042 Male, age 76, both hemispheres 65.7
1977 Female, age 85, both hemispheres 62.7
1901 Male, age 80, both hemispheres 62.5
2619 Male, age 74, both hemispheres 61.9
2729 Female, age 91, right hemisphere 61.4
2438 Female, age 94, left hemisphere 57.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.2
Samples: 197

Max nTPM: 208.9
Min nTPM: 36.6
Std nTPM: 22.1
Median nTPM: 70.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 208.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 151.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 132.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 131.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 123.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 122.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 121.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 120.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 116.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 115.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.8
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 54.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 20.0
Min nTPM: 11.3
Sample A Female 18.0
Sample B Female 15.1
Sample C Male 20.0
Sample D Male 11.3
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.2
Sample A Female 12.8
Sample B Female 13.9
Sample C Male 15.0
Sample D Male 12.2
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.3
Sample A Female 17.4
Sample B Female 13.4
Sample C Male 16.9
Sample D Male 13.3
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.4
Min nTPM: 11.3
Sample A Female 14.8
Sample B Female 15.8
Sample C Male 17.4
Sample D Male 11.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 215.4
Samples: 4

Max nTPM: 238.7
Min nTPM: 198.9
Sample A Male 203.3
Sample B Male 220.7
Sample C Female 238.7
Sample D Female 198.9
Hippocampal formation
nTPM: 228.8
Samples: 4

Max nTPM: 272.6
Min nTPM: 196.7
Sample A Male 272.6
Sample B Male 196.7
Sample C Female 214.6
Sample D Female 231.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69407110 Antisense, RP_050412_02_H08, Mouse strain C57BL/6J (56 days, male) 0.1

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