HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:29.2 nTPM
FANTOM5:93.7 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:40.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037782
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1898 Male, age 80, left hemisphere 27.0
1911 Female, age 85, right hemisphere 26.3
2529 Female, age 94, left hemisphere 26.1
1855 Male, age 76, left hemisphere 25.1
2148 Female, age 91, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.9
Dentate gyrus
nTPM: 25.6
2530 Female, age 94, left hemisphere 26.2
2010 Male, age 76, both hemispheres 26.1
1927 Female, age 91, both hemispheres 25.8
2528 Male, age 74, both hemispheres 25.8
2246 Female, age 85, both hemispheres 25.0
2531 Female, age 67, both hemispheres 24.9
Entorhinal gyrus
nTPM: 25.3
1938 Female, age 85, left hemisphere 27.5
2764 Male, age 80, right hemisphere 25.5
2686 Male, age 75, right hemisphere 25.3
1787 Male, age 76, left hemisphere 25.0
2613 Female, age 94, left hemisphere 24.8
2117 Female, age 91, right hemisphere 23.8
Hippocampus, CA1
nTPM: 26.5
1873 Female, age 85, both hemispheres 27.6
2045 Male, age 76, both hemispheres 27.0
2749 Male, age 80, left hemisphere 26.6
2527 Male, age 74, both hemispheres 26.1
2082 Female, age 91, right hemisphere 25.0
Hippocampus, CA2
nTPM: 26.0
1892 Male, age 76, both hemispheres 28.3
2249 Male, age 74, both hemispheres 27.5
2437 Female, age 94, left hemisphere 25.3
1940 Female, age 85, left hemisphere 25.0
1963 Male, age 80, left hemisphere 25.0
2113 Female, age 91, right hemisphere 24.5
Hippocampus, CA3
nTPM: 25.9
1867 Male, age 76, both hemispheres 27.0
2137 Male, age 80, left hemisphere 26.2
1891 Female, age 85, both hemispheres 26.1
2436 Male, age 74, both hemispheres 25.6
2861 Female, age 67, both hemispheres 25.2
2620 Female, age 94, left hemisphere 25.1
Parahippocampal cortex
nTPM: 26.0
1850 Male, age 80, both hemispheres 27.3
2532 Female, age 72, left hemisphere 26.9
2692 Male, age 74, both hemispheres 26.8
2693 Female, age 94, both hemispheres 26.8
2250 Female, age 67, right hemisphere 26.2
1933 Female, age 85, both hemispheres 26.1
1990 Female, age 91, right hemisphere 26.0
2245 Female, age 91, both hemispheres 26.0
2018 Male, age 76, both hemispheres 25.1
2622 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 27.2
1841 Female, age 85, right hemisphere 28.4
1847 Female, age 91, left hemisphere 27.6
1794 Male, age 80, right hemisphere 27.2
2521 Female, age 94, right hemisphere 27.2
2848 Male, age 76, right hemisphere 25.9
Subiculum
nTPM: 25.5
1901 Male, age 80, both hemispheres 26.6
1977 Female, age 85, both hemispheres 25.8
2438 Female, age 94, left hemisphere 25.7
2619 Male, age 74, both hemispheres 25.5
2729 Female, age 91, right hemisphere 25.0
2042 Male, age 76, both hemispheres 24.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.2
Samples: 197

Max nTPM: 82.9
Min nTPM: 12.0
Std nTPM: 8.7
Median nTPM: 28.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 82.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 46.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 43.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 43.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 43.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 42.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 42.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.7
FF:10169-103B7 60 years, female 123.4
FF:10153-102I9 76 years, female 63.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.8
Sample A Female 23.6
Sample B Female 19.4
Sample C Male 20.6
Sample D Male 18.8
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 27.5
Min nTPM: 17.4
Sample A Female 18.4
Sample B Female 27.5
Sample C Male 18.6
Sample D Male 17.4
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 24.5
Min nTPM: 16.2
Sample A Female 24.5
Sample B Female 17.6
Sample C Male 16.2
Sample D Male 17.4
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.4
Min nTPM: 14.6
Sample A Female 21.4
Sample B Female 16.6
Sample C Male 17.5
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 51.1
Min nTPM: 30.1
Sample A Male 45.5
Sample B Male 51.1
Sample C Female 36.9
Sample D Female 30.1
Hippocampal formation
nTPM: 39.0
Samples: 4

Max nTPM: 43.0
Min nTPM: 31.0
Sample A Male 39.8
Sample B Male 42.2
Sample C Female 31.0
Sample D Female 43.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70474881 Antisense, RP_050623_01_C05, Mouse strain C57BL/6J (56 days, male) 0.1

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