HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:13.6 nTPM
FANTOM5:64.4 Scaled Tags Per Million
Pig:52.9 nTPM
Mouse:38.3 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041099
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1911 Female, age 85, right hemisphere 19.3
2621 Female, age 67, right hemisphere 11.0
2529 Female, age 94, left hemisphere 10.0
1898 Male, age 80, left hemisphere 8.0
2148 Female, age 91, left hemisphere 8.0
1855 Male, age 76, left hemisphere 5.8
Dentate gyrus
nTPM: 7.1
1927 Female, age 91, both hemispheres 20.6
2246 Female, age 85, both hemispheres 9.5
2531 Female, age 67, both hemispheres 4.7
2528 Male, age 74, both hemispheres 4.6
2010 Male, age 76, both hemispheres 2.7
2530 Female, age 94, left hemisphere 0.5
Entorhinal gyrus
nTPM: 8.0
1938 Female, age 85, left hemisphere 14.0
2613 Female, age 94, left hemisphere 13.9
1787 Male, age 76, left hemisphere 6.3
2764 Male, age 80, right hemisphere 6.0
2686 Male, age 75, right hemisphere 4.0
2117 Female, age 91, right hemisphere 3.7
Hippocampus, CA1
nTPM: 17.5
2749 Male, age 80, left hemisphere 42.5
2527 Male, age 74, both hemispheres 17.7
2082 Female, age 91, right hemisphere 14.7
1873 Female, age 85, both hemispheres 8.0
2045 Male, age 76, both hemispheres 4.5
Hippocampus, CA2
nTPM: 13.8
2113 Female, age 91, right hemisphere 26.7
2249 Male, age 74, both hemispheres 13.9
1963 Male, age 80, left hemisphere 13.7
1892 Male, age 76, both hemispheres 13.0
1940 Female, age 85, left hemisphere 10.4
2437 Female, age 94, left hemisphere 5.3
Hippocampus, CA3
nTPM: 17.8
2137 Male, age 80, left hemisphere 57.2
2436 Male, age 74, both hemispheres 15.7
1867 Male, age 76, both hemispheres 12.0
1891 Female, age 85, both hemispheres 9.7
2620 Female, age 94, left hemisphere 8.5
2861 Female, age 67, both hemispheres 3.4
Parahippocampal cortex
nTPM: 8.0
2245 Female, age 91, both hemispheres 23.3
2250 Female, age 67, right hemisphere 10.9
2018 Male, age 76, both hemispheres 10.0
1990 Female, age 91, right hemisphere 9.7
1850 Male, age 80, both hemispheres 8.6
2693 Female, age 94, both hemispheres 5.3
1933 Female, age 85, both hemispheres 4.6
2532 Female, age 72, left hemisphere 2.5
2692 Male, age 74, both hemispheres 2.5
2622 Female, age 67, right hemisphere 2.1
Perirhinal gyrus
nTPM: 10.6
1847 Female, age 91, left hemisphere 21.7
2521 Female, age 94, right hemisphere 10.6
1794 Male, age 80, right hemisphere 9.5
1841 Female, age 85, right hemisphere 8.2
2848 Male, age 76, right hemisphere 3.1
Subiculum
nTPM: 7.5
1901 Male, age 80, both hemispheres 20.4
1977 Female, age 85, both hemispheres 8.8
2042 Male, age 76, both hemispheres 6.1
2729 Female, age 91, right hemisphere 4.3
2438 Female, age 94, left hemisphere 2.8
2619 Male, age 74, both hemispheres 2.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.6
Samples: 197

Max nTPM: 50.6
Min nTPM: 0.4
Std nTPM: 11.8
Median nTPM: 9.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 50.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 49.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 49.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 48.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 46.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 44.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 44.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 42.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 39.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.4
FF:10169-103B7 60 years, female 85.8
FF:10153-102I9 76 years, female 43.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 50.6
Min nTPM: 42.5
Sample A Female 50.6
Sample B Female 47.7
Sample C Male 42.5
Sample D Male 43.9
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 35.7
Min nTPM: 26.5
Sample A Female 27.4
Sample B Female 33.2
Sample C Male 35.7
Sample D Male 26.5
Subiculum
nTPM: 52.9
Samples: 4

Max nTPM: 66.1
Min nTPM: 43.8
Sample A Female 66.1
Sample B Female 52.6
Sample C Male 49.2
Sample D Male 43.8
Ventral hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 41.7
Min nTPM: 27.6
Sample A Female 28.6
Sample B Female 39.4
Sample C Male 27.6
Sample D Male 41.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 43.7
Min nTPM: 34.6
Sample A Male 37.2
Sample B Male 34.6
Sample C Female 37.6
Sample D Female 43.7
Hippocampal formation
nTPM: 34.2
Samples: 4

Max nTPM: 39.4
Min nTPM: 28.8
Sample A Male 39.4
Sample B Male 35.3
Sample C Female 33.3
Sample D Female 28.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
70596234 Antisense, RP_050628_04_F04, Mouse strain C57BL/6J (56 days, male) 3.1
71493867 Antisense, RP_050913_02_H07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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