We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HBA1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HBA1
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:183.4 nTPM
HPA:183.4 nTPM
FANTOM5:0.0 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 183.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 121.4
2301 Female, age 85, both hemispheres 163.1
2090 Male, age 80, both hemispheres 130.4
2188 Female, age 91, both hemispheres 120.5
1984 Male, age 76, both hemispheres 71.6
Dorsal cochlear nucleus
nTPM: 112.0
2378 Male, age 80, both hemispheres 188.0
2802 Male, age 74, right hemisphere 116.1
2187 Female, age 91, both hemispheres 94.7
2058 Male, age 76, both hemispheres 81.2
2370 Male, age 61, both hemispheres 80.1
Dorsal tegmental nucleus
nTPM: 121.9
2326 Male, age 74, both hemispheres 217.0
2358 Male, age 61, both hemispheres 104.0
1936 Male, age 76, left hemisphere 84.4
2083 Male, age 80, both hemispheres 82.3
Dorsolateral tegmental area
nTPM: 73.9
2751 Female, age 85, both hemispheres 135.1
2360 Male, age 74, both hemispheres 80.5
2654 Male, age 80, both hemispheres 80.1
2337 Male, age 61, both hemispheres 43.0
2141 Male, age 76, both hemispheres 31.1
Kolliker-Fuse nucleus
nTPM: 81.2
2315 Male, age 76, right hemisphere 111.8
2163 Male, age 80, both hemispheres 72.0
2793 Female, age 91, left hemisphere 59.9
Lateral lemniscal nuclei
nTPM: 64.1
2169 Male, age 76, both hemispheres 83.0
2746 Female, age 85, left hemisphere 69.2
2453 Male, age 74, right hemisphere 68.6
2320 Female, age 91, left hemisphere 52.4
2036 Male, age 80, both hemispheres 47.4
Lateral parabrachial nucleus
nTPM: 92.0
2792 Male, age 76, both hemispheres 161.6
2139 Female, age 85, right hemisphere 92.2
2013 Male, age 80, both hemispheres 81.8
2790 Male, age 61, both hemispheres 32.5
Lateral vestibular nucleus
nTPM: 96.3
2184 Male, age 76, both hemispheres 100.3
2311 Male, age 80, both hemispheres 92.2
Locus coeruleus
nTPM: 78.8
2720 Male, age 74, both hemispheres 234.8
2317 Female, age 72, unknown 93.4
2014 Male, age 55, unknown 63.3
2788 Male, age 74, unknown 61.2
2162 Male, age 80, both hemispheres 52.3
1980 Male, age 76, both hemispheres 27.9
2123 Female, age 91, both hemispheres 18.9
Medial olivary nucleus
nTPM: 71.3
2851 Male, age 80, both hemispheres 122.3
1962 Male, age 76, both hemispheres 85.8
2138 Female, age 91, both hemispheres 49.7
1943 Male, age 61, both hemispheres 27.5
Medial parabrachial nucleus
nTPM: 84.7
2463 Female, age 85, right hemisphere 128.4
2786 Male, age 76, both hemispheres 99.4
2170 Female, age 91, both hemispheres 87.1
2854 Male, age 80, both hemispheres 83.7
2156 Male, age 61, both hemispheres 25.1
Medial periolivary nuclei
nTPM: 86.2
2458 Female, age 91, both hemispheres 199.0
2063 Male, age 76, both hemispheres 68.9
2081 Male, age 80, both hemispheres 63.0
2791 Male, age 74, right hemisphere 55.5
2171 Female, age 85, both hemispheres 44.4
Motor facial nucleus
nTPM: 111.4
2795 Female, age 91, both hemispheres 190.5
2697 Female, age 85, both hemispheres 170.9
2327 Male, age 80, both hemispheres 115.7
2062 Male, age 76, both hemispheres 84.1
2126 Male, age 61, both hemispheres 53.9
2365 Male, age 74, right hemisphere 53.5
Motor trigeminal nucleus
nTPM: 90.3
2321 Female, age 91, both hemispheres 145.0
2560 Male, age 74, both hemispheres 101.1
2309 Male, age 76, both hemispheres 91.8
2079 Male, age 80, both hemispheres 66.9
2335 Male, age 61, both hemispheres 46.5
Nuclei of the trapezoid body
nTPM: 64.8
2166 Male, age 80, both hemispheres 95.9
2368 Female, age 91, both hemispheres 83.4
1983 Male, age 76, both hemispheres 75.9
2159 Male, age 61, both hemispheres 45.3
2735 Female, age 85, both hemispheres 23.6
Paramedian reticular nucleus
nTPM: 125.7
2050 Female, age 85, both hemispheres 277.2
2313 Male, age 61, both hemispheres 82.3
2057 Male, age 80, both hemispheres 72.3
2052 Male, age 76, both hemispheres 70.9
Pontine nuclei
nTPM: 68.8
2319 Female, age 91, both hemispheres 97.2
1968 Male, age 76, left hemisphere 83.3
1863 Male, age 55, unknown 75.9
2454 Male, age 74, left hemisphere 71.9
2109 Female, age 72, unknown 65.5
2787 Female, age 85, both hemispheres 59.5
2115 Male, age 80, left hemisphere 58.4
2727 Male, age 61, right hemisphere 39.0
Pontine raphe nucleus
nTPM: 100.3
2122 Female, age 85, midline 126.3
2853 Male, age 76, midline 74.3
Posteroventral cochlear nucleus
nTPM: 111.7
2752 Female, age 85, both hemispheres 244.0
2135 Female, age 91, both hemispheres 125.6
2341 Male, age 80, both hemispheres 77.6
2371 Male, age 61, both hemispheres 56.1
2070 Male, age 76, both hemispheres 55.1
Principal sensory trigeminal nucleus
nTPM: 66.6
2324 Male, age 76, both hemispheres 117.3
2158 Male, age 61, both hemispheres 53.5
2367 Female, age 91, left hemisphere 49.0
2008 Male, age 80, left hemisphere 46.6
Reticular pontine nucleus, caudal
nTPM: 122.7
2457 Female, age 91, both hemispheres 179.0
2559 Male, age 74, both hemispheres 171.4
2092 Male, age 76, both hemispheres 78.4
2332 Male, age 80, right hemisphere 62.1
Reticular pontine nucleus, oral
nTPM: 93.3
2366 Female, age 91, both hemispheres 144.0
2012 Female, age 85, both hemispheres 117.6
2167 Male, age 76, both hemispheres 73.7
1939 Male, age 80, both hemispheres 67.8
2361 Male, age 74, both hemispheres 63.6
Reticulotegmental nucleus
nTPM: 112.8
2452 Male, age 74, both hemispheres 170.6
2325 Male, age 76, both hemispheres 109.4
2322 Female, age 91, both hemispheres 94.0
2333 Male, age 80, both hemispheres 77.3
Spinal trigeminal nucleus, oral
nTPM: 183.4
1978 Male, age 76, both hemispheres 279.7
2164 Male, age 80, both hemispheres 160.5
2737 Female, age 85, both hemispheres 110.0
Subcoeruleus area
nTPM: 111.4
2451 Male, age 74, both hemispheres 154.4
2369 Female, age 85, left hemisphere 143.6
2089 Male, age 76, left hemisphere 118.0
1958 Male, age 80, both hemispheres 80.7
2323 Female, age 91, left hemisphere 60.1
Superior olive
nTPM: 102.1
2329 Male, age 80, right hemisphere 161.9
2020 Male, age 76, both hemispheres 121.9
2561 Female, age 91, both hemispheres 102.7
2364 Male, age 74, right hemisphere 92.3
1875 Female, age 85, both hemispheres 31.5
Superior vestibular nucleus
nTPM: 71.5
2383 Male, age 74, both hemispheres 86.3
2015 Male, age 80, both hemispheres 84.5
2061 Male, age 76, both hemispheres 43.6
Ventral periolivary nuclei
nTPM: 88.2
2794 Female, age 91, left hemisphere 165.3
2023 Male, age 76, both hemispheres 89.6
2165 Male, age 80, both hemispheres 63.2
2130 Female, age 85, both hemispheres 34.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 137.7
2161 Male, age 80, both hemispheres 306.4
2456 Female, age 91, both hemispheres 197.6
2359 Male, age 61, both hemispheres 119.0
1959 Male, age 76, both hemispheres 77.2
2840 Female, age 85, both hemispheres 67.2
2449 Male, age 74, both hemispheres 58.9

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 0.0
FF:10182-103D2 60 years, female 0.1
FF:10165-103B3 76 years, female 0.0
Pons
Scaled Tags Per Million: 0.0
FF:10033-101E6 18-54 years, mixed 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.