HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:19.3 nTPM
FANTOM5:89.7 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:34.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
2529 Female, age 94, left hemisphere 21.7
2621 Female, age 67, right hemisphere 20.9
1855 Male, age 76, left hemisphere 17.9
1911 Female, age 85, right hemisphere 15.2
2148 Female, age 91, left hemisphere 14.2
1898 Male, age 80, left hemisphere 12.4
Dentate gyrus
nTPM: 12.7
2246 Female, age 85, both hemispheres 18.4
1927 Female, age 91, both hemispheres 13.5
2531 Female, age 67, both hemispheres 13.0
2010 Male, age 76, both hemispheres 12.5
2530 Female, age 94, left hemisphere 9.6
2528 Male, age 74, both hemispheres 9.4
Entorhinal gyrus
nTPM: 16.1
1938 Female, age 85, left hemisphere 25.8
2686 Male, age 75, right hemisphere 21.2
2117 Female, age 91, right hemisphere 17.3
1787 Male, age 76, left hemisphere 10.9
2613 Female, age 94, left hemisphere 10.6
2764 Male, age 80, right hemisphere 10.5
Hippocampus, CA1
nTPM: 15.2
2527 Male, age 74, both hemispheres 20.8
2749 Male, age 80, left hemisphere 18.0
2045 Male, age 76, both hemispheres 13.4
2082 Female, age 91, right hemisphere 12.1
1873 Female, age 85, both hemispheres 11.8
Hippocampus, CA2
nTPM: 12.9
2249 Male, age 74, both hemispheres 15.2
1892 Male, age 76, both hemispheres 14.8
1940 Female, age 85, left hemisphere 12.4
2437 Female, age 94, left hemisphere 12.4
1963 Male, age 80, left hemisphere 11.3
2113 Female, age 91, right hemisphere 11.1
Hippocampus, CA3
nTPM: 14.0
2861 Female, age 67, both hemispheres 18.5
1867 Male, age 76, both hemispheres 16.6
2436 Male, age 74, both hemispheres 15.4
2137 Male, age 80, left hemisphere 14.8
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 7.3
Parahippocampal cortex
nTPM: 17.1
1933 Female, age 85, both hemispheres 29.0
2692 Male, age 74, both hemispheres 22.5
2250 Female, age 67, right hemisphere 20.2
2245 Female, age 91, both hemispheres 18.2
2622 Female, age 67, right hemisphere 17.0
2018 Male, age 76, both hemispheres 14.1
2693 Female, age 94, both hemispheres 13.9
2532 Female, age 72, left hemisphere 12.6
1850 Male, age 80, both hemispheres 12.4
1990 Female, age 91, right hemisphere 11.3
Perirhinal gyrus
nTPM: 13.7
1847 Female, age 91, left hemisphere 15.0
1841 Female, age 85, right hemisphere 14.6
2521 Female, age 94, right hemisphere 14.2
1794 Male, age 80, right hemisphere 12.5
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 13.6
2438 Female, age 94, left hemisphere 19.3
2619 Male, age 74, both hemispheres 13.7
2729 Female, age 91, right hemisphere 12.8
1977 Female, age 85, both hemispheres 12.3
2042 Male, age 76, both hemispheres 12.2
1901 Male, age 80, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 87.2
Min nTPM: 1.2
Std nTPM: 14.5
Median nTPM: 16.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 87.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 78.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 78.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 58.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 54.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 51.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 50.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 50.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 49.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 47.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.7
FF:10169-103B7 60 years, female 117.1
FF:10153-102I9 76 years, female 62.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 22.5
Min nTPM: 19.8
Sample A Female 22.1
Sample B Female 22.5
Sample C Male 19.8
Sample D Male 20.9
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 46.5
Min nTPM: 12.5
Sample A Female 12.5
Sample B Female 46.5
Sample C Male 27.4
Sample D Male 18.2
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 9.4
Sample A Female 11.1
Sample B Female 12.1
Sample C Male 9.4
Sample D Male 17.7
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 22.7
Min nTPM: 11.1
Sample A Female 13.5
Sample B Female 15.4
Sample C Male 11.1
Sample D Male 22.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 36.4
Min nTPM: 31.2
Sample A Male 33.4
Sample B Male 36.1
Sample C Female 36.4
Sample D Female 31.2
Hippocampal formation
nTPM: 24.0
Samples: 4

Max nTPM: 26.1
Min nTPM: 21.9
Sample A Male 26.1
Sample B Male 21.9
Sample C Female 23.2
Sample D Female 24.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
77924476 Antisense, RP_070219_02_A10, Mouse strain C57BL/6J (56 days, male) 0.3

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