HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:36.9 nTPM
HPA:36.9 nTPM
GTEx:116.1 nTPM
FANTOM5:1.4 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:106.4 nTPM
Allen mouse:14.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021256Antibody HPA021429
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Hippocampus
nTPM: 33.1
2621 Female, age 67, right hemisphere 58.4
1898 Male, age 80, left hemisphere 34.3
2148 Female, age 91, left hemisphere 32.7
2529 Female, age 94, left hemisphere 26.8
1911 Female, age 85, right hemisphere 23.7
1855 Male, age 76, left hemisphere 23.0
Dentate gyrus
nTPM: 28.6
2530 Female, age 94, left hemisphere 43.5
2531 Female, age 67, both hemispheres 39.4
1927 Female, age 91, both hemispheres 32.4
2010 Male, age 76, both hemispheres 19.4
2246 Female, age 85, both hemispheres 19.0
2528 Male, age 74, both hemispheres 18.0
Entorhinal gyrus
nTPM: 31.1
2613 Female, age 94, left hemisphere 61.8
2686 Male, age 75, right hemisphere 37.2
2764 Male, age 80, right hemisphere 34.0
1787 Male, age 76, left hemisphere 24.5
1938 Female, age 85, left hemisphere 18.6
2117 Female, age 91, right hemisphere 10.5
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 55.6
2527 Male, age 74, both hemispheres 35.3
1873 Female, age 85, both hemispheres 23.8
2082 Female, age 91, right hemisphere 18.4
2045 Male, age 76, both hemispheres 15.1
Hippocampus, CA2
nTPM: 25.6
2437 Female, age 94, left hemisphere 42.2
1963 Male, age 80, left hemisphere 35.7
1892 Male, age 76, both hemispheres 29.7
2113 Female, age 91, right hemisphere 21.1
2249 Male, age 74, both hemispheres 14.1
1940 Female, age 85, left hemisphere 10.8
Hippocampus, CA3
nTPM: 36.9
2861 Female, age 67, both hemispheres 68.6
2620 Female, age 94, left hemisphere 64.0
2137 Male, age 80, left hemisphere 50.3
1867 Male, age 76, both hemispheres 17.0
1891 Female, age 85, both hemispheres 12.4
2436 Male, age 74, both hemispheres 9.0
Parahippocampal cortex
nTPM: 28.0
2622 Female, age 67, right hemisphere 53.1
2245 Female, age 91, both hemispheres 48.0
2693 Female, age 94, both hemispheres 34.1
2692 Male, age 74, both hemispheres 26.7
1990 Female, age 91, right hemisphere 21.6
2532 Female, age 72, left hemisphere 21.5
1850 Male, age 80, both hemispheres 20.6
2250 Female, age 67, right hemisphere 20.4
1933 Female, age 85, both hemispheres 17.6
2018 Male, age 76, both hemispheres 16.7
Perirhinal gyrus
nTPM: 26.1
2521 Female, age 94, right hemisphere 31.8
1794 Male, age 80, right hemisphere 30.1
1847 Female, age 91, left hemisphere 29.8
1841 Female, age 85, right hemisphere 21.4
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 19.5
2619 Male, age 74, both hemispheres 32.6
2438 Female, age 94, left hemisphere 25.3
1901 Male, age 80, both hemispheres 22.8
1977 Female, age 85, both hemispheres 16.5
2729 Female, age 91, right hemisphere 11.5
2042 Male, age 76, both hemispheres 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 116.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.1
Samples: 197

Max nTPM: 397.8
Min nTPM: 13.4
Std nTPM: 58.4
Median nTPM: 107.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 397.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 294.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 284.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 268.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 245.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 231.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 228.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 227.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 219.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 217.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 217.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.4
FF:10169-103B7 60 years, female 2.0
FF:10153-102I9 76 years, female 0.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.4
Sample A Female 30.9
Sample B Female 26.4
Sample C Male 27.6
Sample D Male 20.4
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 34.6
Sample A Female 39.2
Sample B Female 34.6
Sample C Male 43.4
Sample D Male 36.9
Subiculum
nTPM: 32.2
Samples: 4

Max nTPM: 48.4
Min nTPM: 21.9
Sample A Female 48.4
Sample B Female 25.8
Sample C Male 32.5
Sample D Male 21.9
Ventral hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 40.4
Min nTPM: 19.9
Sample A Female 27.8
Sample B Female 19.9
Sample C Male 40.4
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.4
Samples: 4

Max nTPM: 113.5
Min nTPM: 96.9
Sample A Male 110.2
Sample B Male 105.0
Sample C Female 96.9
Sample D Female 113.5
Hippocampal formation
nTPM: 105.5
Samples: 4

Max nTPM: 108.8
Min nTPM: 100.4
Sample A Male 100.4
Sample B Male 107.1
Sample C Female 108.8
Sample D Female 105.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.5
68545794 Antisense, RP_050120_01_E05, Mouse strain C57BL/6J (56 days, male) 14.5

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