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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
4822.9
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
15593.6
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
15384.6
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
13284.9
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
12652.3
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
12495.4
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
12257.8
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
11361.1
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
11310.4
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
11294.0
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
11230.3
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
10856.2
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
10593.8
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
10547.7
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
10533.4
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
9989.9
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
9970.0
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
9840.8
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
9758.2
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
9689.6
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
9678.9
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
9629.2
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
9026.5
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
8983.6
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
8935.4
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
8920.2
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
8903.5
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
8860.6
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
8649.7
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
8501.6
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
8497.3
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
8422.8
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
8341.7
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
8341.1
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
8277.4
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
8259.0
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
8190.9
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
8109.9
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
8097.9
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
8030.7
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
7994.2
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
7991.0
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
7932.2
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
7906.4
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
7852.8
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
7772.0
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
7737.7
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
7711.0
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
7702.6
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
7696.8
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
7501.7
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
7409.9
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
7349.0
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
7326.7
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
7324.1
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
7259.8
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
7235.8
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
7004.4
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
6989.7
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
6969.3
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
6957.8
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
6927.2
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
6910.1
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
6894.0
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
6874.4
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
6873.9
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
6778.8
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
6777.8
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
6743.7
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
6717.5
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
6632.3
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
6584.7
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
6532.9
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
6468.2
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
6454.2
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
6451.9
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
6415.4
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
6391.1
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
6381.5
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
6343.6
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
6320.2
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
6313.4
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
6297.1
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
6292.9
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
6157.4
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
6147.7
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
6136.5
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
6108.1
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
5994.7
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
5976.8
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
5919.9
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
5917.8
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
5911.3
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
5885.5
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
5881.5
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
5839.7
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
5810.3
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
5796.3
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
5761.3
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
5729.1
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
5728.3
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
5712.6
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
5707.2
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
5701.9
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
5677.5
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
5665.6
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
5648.8
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
5645.4
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
5618.9
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
5549.7
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
5533.7
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
5402.7
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
5382.0
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
5359.3
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
5353.5
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
5342.1
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
5336.7
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
5267.5
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
5259.5
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
5212.9
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
5205.1
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
5180.5
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
5168.7
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
5137.8
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
5096.1
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
5093.1
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
5045.1
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
5035.7
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
5010.4
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
4997.3
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
4946.5
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
4931.9
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
4928.2
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
4918.4
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
4916.0
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
4901.4
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
4900.0
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
4860.2
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
4855.6
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
4848.6
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
4801.6
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
4780.3
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
4767.3
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
4754.3
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
4743.4
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
4742.1
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
4723.8
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
4715.9
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
4714.3
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
4697.1
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
4692.8
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
4668.8
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
4668.6
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
4651.6
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
4640.4
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
4627.7
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
4626.0
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
4602.0
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
4598.1
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
4575.8
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
4555.3
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
4550.1
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
4537.6
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
4519.2
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
4511.1
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
4491.5
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
4483.7
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
4480.7
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
4473.3
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
4463.9
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
4425.7
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
4424.5
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
4373.5
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
4367.4
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
4362.4
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
4359.1
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
4349.1
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
4343.3
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
4303.1
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
4270.3
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
4267.7
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
4258.2
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
4257.0
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
4202.6
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
4196.9
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
4184.0
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
4168.3
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
4162.2
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
4131.0
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
4119.0
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
4115.5
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
4102.6
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
4100.8
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
4100.0
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
4094.7
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
4067.4
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
4060.7
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
4053.5
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
4024.2
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
4021.6
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
4017.5
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
3997.7
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
3982.2
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
3952.3
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
3917.2
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
3913.1
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
3855.9
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
3851.6
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
3842.9
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
3825.7
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
3814.5
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
3805.9
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
3802.9
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
3797.9
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
3776.6
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
3767.8
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
3737.3
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
3693.2
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
3647.1
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
3605.0
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
3564.8
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
3541.6
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
3540.3
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
3532.0
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
3530.6
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
3523.5
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
3511.3
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
3505.6
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
3495.2
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
3481.7
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
3480.0
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
3468.1
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
3464.4
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
3443.2
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
3434.2
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
3426.8
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
3418.7
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
3365.3
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
3355.7
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
3354.8
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
3341.2
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
3329.9
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
3281.6
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
3269.7
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
3250.6
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
3240.5
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
3213.1
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
3208.4
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
3205.4
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
3197.8
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
3197.3
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
3180.1
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
3170.9
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
3153.8
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
3146.4
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
3131.9
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
3129.5
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
3123.8
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
3107.9
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
3107.2
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
3084.5
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
3062.0
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
3042.7
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
3042.6
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
3041.6
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
3039.2
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
3032.6
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
3027.7
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
3016.4
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
3012.6
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
3011.9
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
2997.1
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
2993.9
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
2969.6
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
2951.0
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
2912.5
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
2899.7
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
2899.7
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
2855.2
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
2845.5
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
2827.4
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
2827.2
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
2821.4
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
2816.0
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
2810.3
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
2801.5
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
2795.4
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
2791.4
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
2780.0
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
2768.5
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
2726.9
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
2721.1
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
2718.9
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
2713.5
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
2683.6
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
2681.2
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
2653.3
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
2628.4
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
2611.3
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
2598.0
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
2568.6
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
2530.2
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
2525.6
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
2522.6
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
2520.9
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
2509.5
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
2508.4
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
2504.4
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
2502.3
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
2496.6
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
2487.2
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
2474.3
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
2470.0
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
2467.5
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
2423.4
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
2418.8
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
2407.9
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
2382.8
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
2380.1
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
2360.8
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
2296.7
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2243.5
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
2242.3
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
2241.9
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
2230.3
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
2207.9
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
2148.2
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
2137.8
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
2093.5
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
2067.2
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
2051.9
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
1997.8
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
1940.8
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
1936.7
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
1930.7
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
1912.5
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
1882.8
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
1880.8
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
1837.0
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
1833.6
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
1802.9
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
1750.8
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
1686.2
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
1681.7
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
1631.1
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
1587.3
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
1571.8
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
1486.7
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
1467.2
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
1398.5
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
1357.0
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
1313.4
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
1309.6
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
1192.4
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
486.2
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.